STRINGSTRING
GCA_000820045_00929 GCA_000820045_00929 GCA_000820045_03833 GCA_000820045_03833 GCA_000820045_01316 GCA_000820045_01316 GCA_000820045_02823 GCA_000820045_02823 GCA_000820045_00516 GCA_000820045_00516
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000820045_00929Unannotated protein. (353 aa)
GCA_000820045_03833Unannotated protein. (368 aa)
GCA_000820045_01316Unannotated protein. (353 aa)
GCA_000820045_02823Unannotated protein. (401 aa)
GCA_000820045_00516Unannotated protein. (353 aa)
Your Current Organism:
Aeromonas rivuli
NCBI taxonomy Id: 648794
Other names: A. rivuli, Aeromonas rivuli Figueras et al. 2011, Aeromonas sp. MDC2511, Aeromonas sp. MDC2512, Aeromonas sp. WB4.1-19, Aeromonas sp. WB4.4-101, CECT 7518, DSM 22539, MDC 2511, WB 4.1-19
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