STRINGSTRING
murA murA ddl ddl mraZ mraZ rsmH rsmH Trad_1600 Trad_1600 Trad_1601 Trad_1601 Trad_1602 Trad_1602 mraY mraY murD murD Trad_1605 Trad_1605 murG murG murC murC murB murB Trad_1609 Trad_1609 ftsA ftsA ftsZ ftsZ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
murAUDP-N-acetylglucosamine1- carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (431 aa)
ddlD-alanine/D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. (351 aa)
mraZMraZ protein; COGs: COG2001 conserved hypothetical protein; InterPro IPR020603:IPR003444; KEGG: ddr:Deide_08661 putative MraZ protein; PFAM: MraZ domain; SPTR: C1D1L7 Protein mraZ; TIGRFAM: MraZ protein; PFAM: MraZ protein; TIGRFAM: mraZ protein; Belongs to the MraZ family. (142 aa)
rsmHS-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (339 aa)
Trad_1600KEGG: ttj:TTHA1077 hypothetical protein; SPTR: C1XIY3 Putative uncharacterized protein. (106 aa)
Trad_1601Peptidoglycan glycosyltransferase; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR001460:IPR012338:IPR005311; KEGG: ddr:Deide_08690 putative peptidoglycan glycosyltransferase, precursor; PFAM: penicillin-binding protein transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: C1D1M0 Putative Peptidoglycan glycosyltransferase,; PFAM: Penicillin binding protein transpeptidase domain. (530 aa)
Trad_1602UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein. (459 aa)
mraYGlycosyl transferase, family 4, conserved region; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. (340 aa)
murDUDP-N-acetylmuramoylalanine/D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. (450 aa)
Trad_1605Cell cycle protein; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: tth:TTC0718 cell cycle protein FtsW; PFAM: cell cycle protein; SPTR: Q72JQ0 Cell division protein, ftsW/rodA/spove family; PFAM: Cell cycle protein; Belongs to the SEDS family. (359 aa)
murGUndecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (380 aa)
murCUDP-N-acetylmuramate/alanine ligase; Cell wall formation; Belongs to the MurCDEF family. (459 aa)
murBUDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (289 aa)
Trad_1609Polypeptide-transport-associated domain protein FtsQ-type; COGs: COG1589 Cell division septal protein; InterPro IPR013685; KEGG: dge:Dgeo_1633 cell division protein FtsQ; PFAM: Polypeptide-transport-associated domain protein FtsQ-type; SPTR: Q1IXV6 Cell division protein FtsQ; PFAM: POTRA domain, FtsQ-type. (196 aa)
ftsACell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. (417 aa)
ftsZCell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. (355 aa)
Your Current Organism:
Truepera radiovictrix
NCBI taxonomy Id: 649638
Other names: T. radiovictrix DSM 17093, Truepera radiovictrix DSM 17093, Truepera radiovictrix RQ-24, Truepera radiovictrix str. DSM 17093, Truepera radiovictrix strain DSM 17093
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