STRINGSTRING
Trad_0974 Trad_0974 Trad_2361 Trad_2361 Trad_0570 Trad_0570 Trad_1884 Trad_1884
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Trad_0974ABC transporter related protein; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593:IPR003439:IPR018170; KEGG: dat:HRM2_33790 ABC-type branched-chain amino acid transport system, permease component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C0QMD7 ABC-type branched-chain amino acid transport system, permease component; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter. (290 aa)
Trad_2361ABC transporter related protein; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593:IPR003439; KEGG: ddr:Deide_14460 putative branched-chain amino acid ABC transporter, ATP-binding component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C1XUM1 ABC-type branched-chain amino acid transport systems, ATPase component; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter. (262 aa)
Trad_0570ABC transporter related protein; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: rrs:RoseRS_0622 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A5UQZ1 ABC transporter related; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter. (263 aa)
Trad_1884ABC transporter related protein; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593:IPR003439:IPR001851; KEGG: tth:TTC0599 branched-chain amino acid transport system permease protein LivM/branched-chain amino acid transport ATP-binding protein LivG; PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; SPTR: C1XPX6 ABC-type branched-chain amino acid transport systems, ATPase component; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; Branched-chain amino acid transport system [...] (611 aa)
Your Current Organism:
Truepera radiovictrix
NCBI taxonomy Id: 649638
Other names: T. radiovictrix DSM 17093, Truepera radiovictrix DSM 17093, Truepera radiovictrix RQ-24, Truepera radiovictrix str. DSM 17093, Truepera radiovictrix strain DSM 17093
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