STRINGSTRING
Trad_0135 Trad_0135 Trad_2994 Trad_2994 Trad_2907 Trad_2907 Trad_2758 Trad_2758 Trad_2750 Trad_2750 trmFO trmFO Trad_2428 Trad_2428 Trad_2347 Trad_2347 Trad_2244 Trad_2244 Trad_0177 Trad_0177 Trad_0060 Trad_0060 Trad_2241 Trad_2241 Trad_2195 Trad_2195 Trad_2193 Trad_2193 Trad_2118 Trad_2118 Trad_1831 Trad_1831 Trad_1654 Trad_1654 Trad_1460 Trad_1460 Trad_1459 Trad_1459 Trad_1243 Trad_1243 Trad_1209 Trad_1209 Trad_0899 Trad_0899 Trad_0918 Trad_0918 Trad_1102 Trad_1102 Trad_0494 Trad_0494 Trad_0357 Trad_0357 Trad_1108 Trad_1108 Trad_0583 Trad_0583 Trad_0676 Trad_0676 Trad_0704 Trad_0704 Trad_0760 Trad_0760 Trad_0847 Trad_0847 Trad_0122 Trad_0122
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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a 3D structure is known or predicted
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Trad_0135FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR013027:IPR004099:IPR016156:IPR016040; KEGG: ttj:TTHA1835 NADH oxidase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: Q5SH95 NADH oxidase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain. (445 aa)
Trad_2994Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34. Belongs to the MnmG family. (606 aa)
Trad_2907HI0933 family protein; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR000759:IPR004792; KEGG: dge:Dgeo_1014 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: HI0933 family protein; SPTR: C1XFY2 NADPH-dependent glutamate synthase beta chain-like oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase. (460 aa)
Trad_2758COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027; KEGG: rmr:Rmar_2662 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: NADH dehydrogenase (ubiquinone); SPTR: D0MGH1 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase. (465 aa)
Trad_2750Amine oxidase; COGs: COG3380 NAD/FAD-dependent oxidoreductase; InterPro IPR000759:IPR002937; KEGG: gvi:glr2878 hypothetical protein; PFAM: amine oxidase; SPTR: Q7NCU8 Glr2878 protein; PFAM: Flavin containing amine oxidoreductase. (333 aa)
trmFOGid protein; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. (442 aa)
Trad_2428Lycopene cyclase family protein; COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR003042:IPR008671:IPR010108; KEGG: rrs:RoseRS_2643 lycopene cyclase family protein; PFAM: Lycopene beta and epsilon cyclase; PRIAM: Capsanthin/capsorubin synthase; SPTR: A5UWL4 Lycopene cyclase (CrtL-type); TIGRFAM: lycopene cyclase family protein; PFAM: Lycopene cyclase protein; TIGRFAM: lycopene cyclase family protein. (435 aa)
Trad_2347KEGG: dau:Daud_2097 hypothetical protein; SPTR: B1I6B9 Putative uncharacterized protein. (597 aa)
Trad_2244FAD dependent oxidoreductase; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR006076; KEGG: sru:SRU_1502 beta-carotene ketolase; PFAM: FAD dependent oxidoreductase; SPTR: Q2S2F6 Beta-carotene ketolase; PFAM: FAD dependent oxidoreductase. (512 aa)
Trad_0177COGs: COG0578 Glycerol-3-phosphate dehydrogenase; InterPro IPR006076:IPR000447; KEGG: bid:Bind_0378 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; PRIAM: Glycerol-3-phosphate dehydrogenase; SPTR: C1XTT3 Glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (557 aa)
Trad_0060FAD dependent oxidoreductase; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: ddr:Deide_1p00040 putative FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: C1XF90 Glycine/D-amino acid oxidase, deaminating; PFAM: FAD dependent oxidoreductase. (389 aa)
Trad_2241COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR006076:IPR014105; KEGG: ddr:Deide_2p01180 putative FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: C1XLI5 Phytoene dehydrogenase-like oxidoreductase; TIGRFAM: phytoene desaturase; PFAM: FAD dependent oxidoreductase; TIGRFAM: phytoene desaturase. (478 aa)
Trad_2195Monooxygenase FAD-binding protein; COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR003042:IPR002938; KEGG: ddr:Deide_21790 putative oxidoreductase; PFAM: monooxygenase FAD-binding; SPTR: C1CZF7 Putative oxidoreductase; PFAM: FAD binding domain. (379 aa)
Trad_2193COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR002937:IPR014105:IPR008150; KEGG: hau:Haur_3185 zeta-phytoene desaturase; PFAM: amine oxidase; SPTR: A9B6V4 Zeta-phytoene desaturase; TIGRFAM: phytoene desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase. (502 aa)
Trad_2118COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterProIPR006258:IPR016156:IPR004099:IPR013027:IPR 000815:IPR012999; KEGG: dge:Dgeo_2323 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: C1XI02 Dihydrolipoyl dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase. (461 aa)
Trad_1831HI0933 family protein; COGs: COG2081 flavoprotein; InterPro IPR004792:IPR013027; KEGG: npu:Npun_F4431 hypothetical protein; PFAM: HI0933 family protein; SPTR: A0YTD1 Fumarate reductase/succinate dehydrogenase flavoprotein-like protein; PFAM: HI0933-like protein; TIGRFAM: conserved hypothetical protein TIGR00275. (449 aa)
Trad_1654FAD dependent oxidoreductase; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: cau:Caur_3609 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: C1XT29 Glycine/D-amino acid oxidase, deaminating; PFAM: FAD dependent oxidoreductase. (370 aa)
Trad_1460FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG1251 NAD(P)H-nitrite reductase; InterPro IPR017941:IPR013027:IPR004099:IPR016156; KEGG: rmr:Rmar_0914 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] iron-sulphur domain; SPTR: D0MH23 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] domain. (527 aa)
Trad_1459FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027:IPR004099:IPR000815:IPR016156; KEGG: ade:Adeh_2206 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: Q2IJZ8 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreducta [...] (460 aa)
Trad_1243FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR013027:IPR003042; KEGG: cag:Cagg_0045 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: B8GC24 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase. (395 aa)
Trad_1209Glucose-inhibited division protein A; COGs: COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; InterPro IPR002218; KEGG: tth:TTC1534 NAD(FAD)-utilizing enzyme; PFAM: glucose-inhibited division protein A; SPTR: C1XRE7 NAD/FAD-utilizing enzyme apparently involved in cell division; PFAM: Glucose inhibited division protein A. (259 aa)
Trad_0899COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterProIPR006258:IPR012999:IPR013027:IPR004099:IPR 016156:IPR000815; KEGG: hoh:Hoch_4996 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: B9XMX0 Dihydrolipoyl dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase. (461 aa)
Trad_0918FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterProIPR017896:IPR012285:IPR009051:IPR000759:IPR 013027; KEGG: gyc:GYMC61_2212 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: C1XJ95 Glutamate synthase (NADPH) small subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase. (454 aa)
Trad_1102Fumarate reductase/succinate dehydrogenase flavoprotein domain protein; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR003953; KEGG: rxy:Rxyl_2416 FAD dependent oxidoreductase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: Q1ATD4 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase. (493 aa)
Trad_0494Hypothetical protein; InterPro IPR000815; KEGG: cyn:Cyan7425_1918 hypothetical protein; SPTR: B8HT58 Putative uncharacterized protein. (430 aa)
Trad_0357COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterProIPR003952:IPR013027:IPR003953:IPR004112:IPR 015939:IPR011281:IPR014006; KEGG: ttj:TTHA1454 succinate dehydrogenase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: Q5SIC0 Succinate dehydrogenase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase, flavoprotein subunit, E. coli/mitocho [...] (579 aa)
Trad_1108COGs: COG0492 Thioredoxin reductase; InterPro IPR005982:IPR000103:IPR013027:IPR008255; KEGG: ttj:TTHA1920 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Q72HD8 Thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase. (337 aa)
Trad_0583Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (450 aa)
Trad_0676Amine oxidase; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR002937; KEGG: dra:DR_2015 oxidoreductase, FAD-binding; PFAM: amine oxidase; SPTR: Q9RSV7 Oxidoreductase, FAD-binding; PFAM: Flavin containing amine oxidoreductase. (421 aa)
Trad_0704FAD dependent oxidoreductase; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR017941:IPR006076:IPR005805; KEGG: dba:Dbac_1184 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; Rieske [2Fe-2S] iron-sulphur domain; SPTR: C7LRE2 FAD dependent oxidoreductase; PFAM: Rieske [2Fe-2S] domain; FAD dependent oxidoreductase. (508 aa)
Trad_0760FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0492 Thioredoxin reductase; InterPro IPR013027:IPR000103; KEGG: dge:Dgeo_2331 HI0933-like protein protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Q1IVW1 Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase. (339 aa)
Trad_0847COGs: COG1231 Monoamine oxidase; InterPro IPR002937:IPR001613; KEGG: mar:MAE_40250 putative flavin-containing monoamine oxidase; PFAM: amine oxidase; SPTR: B0JQX8 Putative flavin-containing monoamine oxidase; PFAM: Flavin containing amine oxidoreductase. (455 aa)
Trad_0122COGs: COG1231 Monoamine oxidase; InterPro IPR002937:IPR001613; KEGG: cag:Cagg_2955 amine oxidase; PFAM: amine oxidase; SPTR: B8G682 Amine oxidase; PFAM: Flavin containing amine oxidoreductase. (450 aa)
Your Current Organism:
Truepera radiovictrix
NCBI taxonomy Id: 649638
Other names: T. radiovictrix DSM 17093, Truepera radiovictrix DSM 17093, Truepera radiovictrix RQ-24, Truepera radiovictrix str. DSM 17093, Truepera radiovictrix strain DSM 17093
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