STRINGSTRING
licR_1 licR_1 gatC_1 gatC_1 gatB_1 gatB_1 hrsA hrsA gatC_2 gatC_2 gatB_2 gatB_2 CUN42336.1 CUN42336.1 licR_2 licR_2 licR_3 licR_3 gatB_4 gatB_4 mtlA_2 mtlA_2 gatC_4 gatC_4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
licR_1Probable licABCH operon regulator. (691 aa)
gatC_1PTS system galactitol-specific EIIC component. (458 aa)
gatB_1Galactitol-specific phosphotransferase enzyme IIB component. (92 aa)
hrsAPutative PTS system EIIABC component. (162 aa)
gatC_2PTS system galactitol-specific EIIC component. (451 aa)
gatB_2Galactitol-specific phosphotransferase enzyme IIB component. (94 aa)
CUN42336.1PTS system galactitol-specific transporter subunit IIA. (155 aa)
licR_2Probable licABCH operon regulator. (678 aa)
licR_3Probable licABCH operon regulator. (656 aa)
gatB_4Galactitol-specific phosphotransferase enzyme IIB component. (99 aa)
mtlA_2EIICBA-Mtl. (146 aa)
gatC_4PTS system galactitol-specific EIIC component. (421 aa)
Your Current Organism:
Anaerostipes hadrus
NCBI taxonomy Id: 649756
Other names: A. hadrus, ATCC 29173, Anaerostipes sp. 5/1/63FAA, Clostridiales bacterium SSC/2, DSM 3319, Eubacterium hadrum, JCM 9980, VP 82-52, VPI B2-52, butyrate-producing bacterium SS2/1, butyrate-producing bacterium SSC/2
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