STRINGSTRING
fruA_3 fruA_3 licR_1 licR_1 gatB_1 gatB_1 manP_1 manP_1 licR_3 licR_3 ulaB ulaB manP_2 manP_2 mtlA_3 mtlA_3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fruA_3EIIABC-Fru. (653 aa)
licR_1Probable licABCH operon regulator. (691 aa)
gatB_1Galactitol-specific phosphotransferase enzyme IIB component. (92 aa)
manP_1EIIBCA-Man. (103 aa)
licR_3Probable licABCH operon regulator. (656 aa)
ulaBAscorbate-specific phosphotransferase enzyme IIB component. (97 aa)
manP_2EIIBCA-Man. (116 aa)
mtlA_3EIICBA-Mtl. (625 aa)
Your Current Organism:
Anaerostipes hadrus
NCBI taxonomy Id: 649756
Other names: A. hadrus, ATCC 29173, Anaerostipes sp. 5/1/63FAA, Clostridiales bacterium SSC/2, DSM 3319, Eubacterium hadrum, JCM 9980, VP 82-52, VPI B2-52, butyrate-producing bacterium SS2/1, butyrate-producing bacterium SSC/2
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