(33 nodes) Pentose transmembrane transport, and ABC transporter, permease network (Actinoplanes sp. N902109)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rbsC	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (332 aa)
	L083_0575	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (321 aa)
	L083_0576	ABC sugar transporter ATP-binding protein. (512 aa)
	L083_0577	ABC sugar transporter. (362 aa)
	frcB	Periplasmic binding protein/LacI transcriptional regulator. (348 aa)
	frcC	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (350 aa)
	L083_0717	Monosaccharide-transporting ATPase. (257 aa)
	L083_1003	ROK family protein. (392 aa)
	lsrC	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (417 aa)
	frcA	ABC transporter-like protein. (268 aa)
	L083_1006	Hypothetical protein. (363 aa)
	L083_1661	Rok family protein. (392 aa)
	L083_1662	ABC transporter. (505 aa)
	L083_1663	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (341 aa)
	L083_1664	Periplasmic binding protein/LacI transcriptional regulator. (347 aa)
	chvE	Putative sugar ABC transporter, substrate-binding protein. (375 aa)
	L083_3262	ABC transporter related protein. (517 aa)
	L083_3263	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (410 aa)
	L083_3647	LacI family transcriptional regulator. (352 aa)
	L083_3773	Periplasmic binding protein/LacI transcriptional regulator. (323 aa)
	L083_3774	ABC transporter ATP-binding protein. (508 aa)
	L083_3775	Monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family. (332 aa)
	L083_3776	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (336 aa)
	L083_4320	Hypothetical protein. (371 aa)
	araH	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (416 aa)
	L083_4936	ABC transporter. (515 aa)
	L083_4937	ABC transporter solute-binding protein. (376 aa)
	L083_5321	Multiple sugar-binding periplasmic receptor. (370 aa)
	L083_5322	L-arabinose ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (441 aa)
	L083_5323	Monosaccharide ABC transporter ATP-binding protein, CUT2 family. (516 aa)
	L083_5666	ABC transporter. (352 aa)
	araG	D-xylose ABC transporter, ATP-binding protein. (506 aa)
	L083_5668	Sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family. (347 aa)

Your Current Organism:

Actinoplanes sp. N902109

NCBI taxonomy Id: 649831
Other names: A. sp. N902-109, Actinoplanes sp. N902-109

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L083_0575	L083_0576	L083_0575	L083_0576	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	ABC sugar transporter ATP-binding protein.	0.992
L083_0575	L083_0577	L083_0575	L083_0577	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	ABC sugar transporter.	0.983
L083_0575	L083_0717	L083_0575	L083_0717	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	Monosaccharide-transporting ATPase.	0.634
L083_0575	L083_1662	L083_0575	L083_1662	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter.	0.843
L083_0575	L083_1664	L083_0575	L083_1664	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	Periplasmic binding protein/LacI transcriptional regulator.	0.722
L083_0575	L083_3262	L083_0575	L083_3262	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter related protein.	0.786
L083_0575	L083_3773	L083_0575	L083_3773	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	Periplasmic binding protein/LacI transcriptional regulator.	0.966
L083_0575	L083_3774	L083_0575	L083_3774	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter ATP-binding protein.	0.968
L083_0575	L083_4936	L083_0575	L083_4936	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter.	0.782
L083_0575	L083_5323	L083_0575	L083_5323	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	Monosaccharide ABC transporter ATP-binding protein, CUT2 family.	0.769
L083_0575	L083_5666	L083_0575	L083_5666	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter.	0.809
L083_0575	araG	L083_0575	L083_5667	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	D-xylose ABC transporter, ATP-binding protein.	0.812
L083_0575	frcA	L083_0575	L083_1005	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter-like protein.	0.743
L083_0575	frcB	L083_0575	L083_0715	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	Periplasmic binding protein/LacI transcriptional regulator.	0.651
L083_0575	rbsC	L083_0575	L083_0574	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	0.802
L083_0576	L083_0575	L083_0576	L083_0575	ABC sugar transporter ATP-binding protein.	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	0.992
L083_0576	L083_0577	L083_0576	L083_0577	ABC sugar transporter ATP-binding protein.	ABC sugar transporter.	0.991
L083_0576	L083_1663	L083_0576	L083_1663	ABC sugar transporter ATP-binding protein.	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	0.852
L083_0576	L083_1664	L083_0576	L083_1664	ABC sugar transporter ATP-binding protein.	Periplasmic binding protein/LacI transcriptional regulator.	0.564
L083_0576	L083_3263	L083_0576	L083_3263	ABC sugar transporter ATP-binding protein.	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	0.532