21 items (Phanerochaete carnosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	K5V0W3_PHACS	CDC73_C domain-containing protein. (428 aa)
	K5UYY6_PHACS	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1542 aa)
	K5UY60_PHACS	Uncharacterized protein. (323 aa)
	K5UXM1_PHACS	Uncharacterized protein. (1101 aa)
	K5VVR7_PHACS	Uncharacterized protein. (1070 aa)
	K5W0I9_PHACS	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (124 aa)
	K5W6F3_PHACS	PCI domain-containing protein. (362 aa)
	K5WDJ4_PHACS	Plus3 domain-containing protein. (522 aa)
	K5WJL7_PHACS	Uncharacterized protein. (542 aa)
	K5WLA5_PHACS	Uncharacterized protein. (303 aa)
	K5WQC7_PHACS	Rtt106 domain-containing protein. (575 aa)
	K5WQE4_PHACS	Uncharacterized protein. (781 aa)
	K5WYI7_PHACS	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (85 aa)
	K5X4J0_PHACS	Uncharacterized protein. (508 aa)
	K5V1V8_PHACS	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (483 aa)
	K5V327_PHACS	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (989 aa)
	K5V741_PHACS	Uncharacterized protein. (320 aa)
	K5V975_PHACS	Uncharacterized protein. (2126 aa)
	K5V9H4_PHACS	Uncharacterized protein. (357 aa)
	K5VTQ7_PHACS	Uncharacterized protein. (349 aa)
	K5VVD9_PHACS	Uncharacterized protein. (772 aa)

Your Current Organism:

Phanerochaete carnosa

NCBI taxonomy Id: 650164
Other names: P. carnosa HHB-10118-sp, Phanerochaete carnosa HHB-10118-sp

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K5UXM1_PHACS	K5UY60_PHACS	K5UXM1	K5UY60	Uncharacterized protein.	Uncharacterized protein.	0.777
K5UXM1_PHACS	K5UYY6_PHACS	K5UXM1	K5UYY6	Uncharacterized protein.	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	0.967
K5UXM1_PHACS	K5V0W3_PHACS	K5UXM1	K5V0W3	Uncharacterized protein.	CDC73_C domain-containing protein.	0.999
K5UXM1_PHACS	K5V1V8_PHACS	K5UXM1	K5V1V8	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.504
K5UXM1_PHACS	K5V327_PHACS	K5UXM1	K5V327	Uncharacterized protein.	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.974
K5UXM1_PHACS	K5VTQ7_PHACS	K5UXM1	K5VTQ7	Uncharacterized protein.	Uncharacterized protein.	0.999
K5UXM1_PHACS	K5VVD9_PHACS	K5UXM1	K5VVD9	Uncharacterized protein.	Uncharacterized protein.	0.727
K5UXM1_PHACS	K5VVR7_PHACS	K5UXM1	K5VVR7	Uncharacterized protein.	Uncharacterized protein.	0.990
K5UXM1_PHACS	K5W0I9_PHACS	K5UXM1	K5W0I9	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.896
K5UXM1_PHACS	K5WDJ4_PHACS	K5UXM1	K5WDJ4	Uncharacterized protein.	Plus3 domain-containing protein.	0.997
K5UXM1_PHACS	K5WJL7_PHACS	K5UXM1	K5WJL7	Uncharacterized protein.	Uncharacterized protein.	0.999
K5UXM1_PHACS	K5WLA5_PHACS	K5UXM1	K5WLA5	Uncharacterized protein.	Uncharacterized protein.	0.780
K5UXM1_PHACS	K5WYI7_PHACS	K5UXM1	K5WYI7	Uncharacterized protein.	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	0.617
K5UY60_PHACS	K5UXM1_PHACS	K5UY60	K5UXM1	Uncharacterized protein.	Uncharacterized protein.	0.777
K5UY60_PHACS	K5UYY6_PHACS	K5UY60	K5UYY6	Uncharacterized protein.	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	0.646
K5UY60_PHACS	K5V0W3_PHACS	K5UY60	K5V0W3	Uncharacterized protein.	CDC73_C domain-containing protein.	0.784
K5UY60_PHACS	K5V1V8_PHACS	K5UY60	K5V1V8	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.652
K5UY60_PHACS	K5V327_PHACS	K5UY60	K5V327	Uncharacterized protein.	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.659
K5UY60_PHACS	K5V741_PHACS	K5UY60	K5V741	Uncharacterized protein.	Uncharacterized protein.	0.643
K5UY60_PHACS	K5VTQ7_PHACS	K5UY60	K5VTQ7	Uncharacterized protein.	Uncharacterized protein.	0.760