21 items (Phanerochaete carnosa) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	K5VKI9_PHACS	Uncharacterized protein; Belongs to the cyclin family. (344 aa)
	K5UK26_PHACS	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (367 aa)
	K5UNT6_PHACS	Uncharacterized protein. (155 aa)
	K5UWB4_PHACS	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (410 aa)
	K5UYY6_PHACS	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1542 aa)
	K5V0W3_PHACS	CDC73_C domain-containing protein. (428 aa)
	K5V1V8_PHACS	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (483 aa)
	K5V327_PHACS	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (989 aa)
	K5VSD6_PHACS	Helicase C-terminal domain-containing protein. (181 aa)
	K5VUD5_PHACS	Uncharacterized protein. (329 aa)
	K5VV40_PHACS	AAA domain-containing protein; Belongs to the AAA ATPase family. (399 aa)
	K5VVD9_PHACS	Uncharacterized protein. (772 aa)
	K5VVR7_PHACS	Uncharacterized protein. (1070 aa)
	K5VZG8_PHACS	AAA domain-containing protein; Belongs to the AAA ATPase family. (400 aa)
	K5W3M7_PHACS	CID domain-containing protein. (274 aa)
	K5WDJ4_PHACS	Plus3 domain-containing protein. (522 aa)
	K5WI61_PHACS	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (707 aa)
	K5WJL7_PHACS	Uncharacterized protein. (542 aa)
	K5WQE4_PHACS	Uncharacterized protein. (781 aa)
	K5WQK9_PHACS	Uncharacterized protein. (190 aa)
	K5X868_PHACS	Uncharacterized protein. (239 aa)

Your Current Organism:

Phanerochaete carnosa

NCBI taxonomy Id: 650164
Other names: P. carnosa HHB-10118-sp, Phanerochaete carnosa HHB-10118-sp

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K5UK26_PHACS	K5V1V8_PHACS	K5UK26	K5V1V8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.811
K5UK26_PHACS	K5V327_PHACS	K5UK26	K5V327	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.877
K5UK26_PHACS	K5VKI9_PHACS	K5UK26	K5VKI9	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the cyclin family.	0.765
K5UK26_PHACS	K5VVR7_PHACS	K5UK26	K5VVR7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.674
K5UK26_PHACS	K5W3M7_PHACS	K5UK26	K5W3M7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	CID domain-containing protein.	0.420
K5UK26_PHACS	K5WI61_PHACS	K5UK26	K5WI61	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.827
K5UYY6_PHACS	K5V0W3_PHACS	K5UYY6	K5V0W3	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	CDC73_C domain-containing protein.	0.951
K5UYY6_PHACS	K5V1V8_PHACS	K5UYY6	K5V1V8	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.636
K5UYY6_PHACS	K5V327_PHACS	K5UYY6	K5V327	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.991
K5UYY6_PHACS	K5VVR7_PHACS	K5UYY6	K5VVR7	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	Uncharacterized protein.	0.986
K5UYY6_PHACS	K5WDJ4_PHACS	K5UYY6	K5WDJ4	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	Plus3 domain-containing protein.	0.952
K5UYY6_PHACS	K5WJL7_PHACS	K5UYY6	K5WJL7	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	Uncharacterized protein.	0.995
K5UYY6_PHACS	K5WQK9_PHACS	K5UYY6	K5WQK9	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	Uncharacterized protein.	0.463
K5V0W3_PHACS	K5UYY6_PHACS	K5V0W3	K5UYY6	CDC73_C domain-containing protein.	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	0.951
K5V0W3_PHACS	K5V1V8_PHACS	K5V0W3	K5V1V8	CDC73_C domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.697
K5V0W3_PHACS	K5V327_PHACS	K5V0W3	K5V327	CDC73_C domain-containing protein.	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.972
K5V0W3_PHACS	K5VKI9_PHACS	K5V0W3	K5VKI9	CDC73_C domain-containing protein.	Uncharacterized protein; Belongs to the cyclin family.	0.448
K5V0W3_PHACS	K5VVD9_PHACS	K5V0W3	K5VVD9	CDC73_C domain-containing protein.	Uncharacterized protein.	0.876
K5V0W3_PHACS	K5VVR7_PHACS	K5V0W3	K5VVR7	CDC73_C domain-containing protein.	Uncharacterized protein.	0.997
K5V0W3_PHACS	K5WDJ4_PHACS	K5V0W3	K5WDJ4	CDC73_C domain-containing protein.	Plus3 domain-containing protein.	0.996