45 items (Phanerochaete carnosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	K5WIQ4_PHACS	C2H2-type domain-containing protein. (544 aa)
	K5WHA3_PHACS	Uncharacterized protein. (534 aa)
	K5WH39_PHACS	Uncharacterized protein. (388 aa)
	K5WG95_PHACS	Uncharacterized protein. (781 aa)
	K5WFK0_PHACS	Uncharacterized protein. (318 aa)
	K5WC62_PHACS	KH domain-containing protein. (399 aa)
	K5WAE1_PHACS	Uncharacterized protein. (680 aa)
	K5WAB4_PHACS	Uncharacterized protein. (1483 aa)
	K5WAA4_PHACS	Uncharacterized protein. (846 aa)
	K5W9F7_PHACS	Uncharacterized protein. (620 aa)
	K5W8V8_PHACS	Uncharacterized protein. (749 aa)
	K5W8T1_PHACS	Uncharacterized protein. (329 aa)
	K5W8R2_PHACS	SNRNP27 domain-containing protein. (287 aa)
	K5W7S8_PHACS	Uncharacterized protein. (705 aa)
	K5W7B5_PHACS	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (201 aa)
	K5W5V4_PHACS	Uncharacterized protein. (795 aa)
	K5W528_PHACS	WD_REPEATS_REGION domain-containing protein. (314 aa)
	K5W330_PHACS	J domain-containing protein. (232 aa)
	K5W1X7_PHACS	Uncharacterized protein. (236 aa)
	K5VYN8_PHACS	MPN domain-containing protein. (2353 aa)
	K5VVN0_PHACS	Nuclear cap-binding protein subunit 2. (225 aa)
	K5VVL7_PHACS	DUF2040 domain-containing protein. (320 aa)
	K5VU62_PHACS	Uncharacterized protein. (157 aa)
	K5VU19_PHACS	G-patch domain-containing protein. (908 aa)
	K5VJ07_PHACS	Uncharacterized protein. (149 aa)
	K5VH12_PHACS	RRM domain-containing protein. (165 aa)
	K5VDX3_PHACS	Uncharacterized protein. (496 aa)
	K5VDM5_PHACS	Uncharacterized protein. (584 aa)
	K5VBD2_PHACS	Uncharacterized protein. (486 aa)
	K5V8M4_PHACS	Uncharacterized protein. (726 aa)
	K5V0X3_PHACS	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (413 aa)
	K5US29_PHACS	RRM domain-containing protein. (192 aa)
	K5UMU4_PHACS	Uncharacterized protein. (479 aa)
	K5UJT3_PHACS	Uncharacterized protein. (615 aa)
	K5XAP2_PHACS	WD_REPEATS_REGION domain-containing protein. (373 aa)
	K5XAL5_PHACS	DUF1716 domain-containing protein. (629 aa)
	K5X035_PHACS	Uncharacterized protein. (261 aa)
	K5WZH3_PHACS	Uncharacterized protein. (717 aa)
	K5WYV4_PHACS	Uncharacterized protein. (621 aa)
	K5WXD2_PHACS	Uncharacterized protein. (320 aa)
	K5WQ92_PHACS	Uncharacterized protein. (425 aa)
	K5WPY3_PHACS	Uncharacterized protein. (146 aa)
	K5WP03_PHACS	Tudor domain-containing protein. (246 aa)
	K5WNU6_PHACS	Uncharacterized protein. (216 aa)
	K5WL63_PHACS	Uncharacterized protein. (320 aa)

Your Current Organism:

Phanerochaete carnosa

NCBI taxonomy Id: 650164
Other names: P. carnosa HHB-10118-sp, Phanerochaete carnosa HHB-10118-sp

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K5UJT3_PHACS	K5UMU4_PHACS	K5UJT3	K5UMU4	Uncharacterized protein.	Uncharacterized protein.	0.588
K5UJT3_PHACS	K5US29_PHACS	K5UJT3	K5US29	Uncharacterized protein.	RRM domain-containing protein.	0.732
K5UJT3_PHACS	K5V0X3_PHACS	K5UJT3	K5V0X3	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.746
K5UJT3_PHACS	K5V8M4_PHACS	K5UJT3	K5V8M4	Uncharacterized protein.	Uncharacterized protein.	0.849
K5UJT3_PHACS	K5VDM5_PHACS	K5UJT3	K5VDM5	Uncharacterized protein.	Uncharacterized protein.	0.883
K5UJT3_PHACS	K5VVN0_PHACS	K5UJT3	K5VVN0	Uncharacterized protein.	Nuclear cap-binding protein subunit 2.	0.991
K5UJT3_PHACS	K5W5V4_PHACS	K5UJT3	K5W5V4	Uncharacterized protein.	Uncharacterized protein.	0.468
K5UJT3_PHACS	K5W7B5_PHACS	K5UJT3	K5W7B5	Uncharacterized protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.994
K5UJT3_PHACS	K5W9F7_PHACS	K5UJT3	K5W9F7	Uncharacterized protein.	Uncharacterized protein.	0.772
K5UJT3_PHACS	K5WG95_PHACS	K5UJT3	K5WG95	Uncharacterized protein.	Uncharacterized protein.	0.993
K5UJT3_PHACS	K5WH39_PHACS	K5UJT3	K5WH39	Uncharacterized protein.	Uncharacterized protein.	0.588
K5UJT3_PHACS	K5WIQ4_PHACS	K5UJT3	K5WIQ4	Uncharacterized protein.	C2H2-type domain-containing protein.	0.580
K5UJT3_PHACS	K5WL63_PHACS	K5UJT3	K5WL63	Uncharacterized protein.	Uncharacterized protein.	0.588
K5UJT3_PHACS	K5WPY3_PHACS	K5UJT3	K5WPY3	Uncharacterized protein.	Uncharacterized protein.	0.886
K5UJT3_PHACS	K5WYV4_PHACS	K5UJT3	K5WYV4	Uncharacterized protein.	Uncharacterized protein.	0.695
K5UJT3_PHACS	K5WZH3_PHACS	K5UJT3	K5WZH3	Uncharacterized protein.	Uncharacterized protein.	0.838
K5UJT3_PHACS	K5X035_PHACS	K5UJT3	K5X035	Uncharacterized protein.	Uncharacterized protein.	0.746
K5UMU4_PHACS	K5UJT3_PHACS	K5UMU4	K5UJT3	Uncharacterized protein.	Uncharacterized protein.	0.588
K5UMU4_PHACS	K5VYN8_PHACS	K5UMU4	K5VYN8	Uncharacterized protein.	MPN domain-containing protein.	0.562
K5UMU4_PHACS	K5W5V4_PHACS	K5UMU4	K5W5V4	Uncharacterized protein.	Uncharacterized protein.	0.449