STRINGSTRING
K5WUK9_PHACS K5WUK9_PHACS K5X3Y7_PHACS K5X3Y7_PHACS K5X7T4_PHACS K5X7T4_PHACS K5X9H4_PHACS K5X9H4_PHACS K5XDK4_PHACS K5XDK4_PHACS K5XE76_PHACS K5XE76_PHACS K5XEG5_PHACS K5XEG5_PHACS K5VZE3_PHACS K5VZE3_PHACS K5VYN6_PHACS K5VYN6_PHACS K5VX46_PHACS K5VX46_PHACS K5VVR7_PHACS K5VVR7_PHACS K5VVN0_PHACS K5VVN0_PHACS K5VVD9_PHACS K5VVD9_PHACS K5VV23_PHACS K5VV23_PHACS K5VTW9_PHACS K5VTW9_PHACS K5VTQ7_PHACS K5VTQ7_PHACS K5VSX6_PHACS K5VSX6_PHACS K5VSS4_PHACS K5VSS4_PHACS K5VMA8_PHACS K5VMA8_PHACS K5VKI9_PHACS K5VKI9_PHACS K5VEI0_PHACS K5VEI0_PHACS K5VEH8_PHACS K5VEH8_PHACS K5VDA5_PHACS K5VDA5_PHACS K5VAL5_PHACS K5VAL5_PHACS K5V9R8_PHACS K5V9R8_PHACS K5V8H2_PHACS K5V8H2_PHACS K5V741_PHACS K5V741_PHACS K5V6I8_PHACS K5V6I8_PHACS K5V327_PHACS K5V327_PHACS K5V1V8_PHACS K5V1V8_PHACS K5V0W3_PHACS K5V0W3_PHACS K5UYY6_PHACS K5UYY6_PHACS K5UYC8_PHACS K5UYC8_PHACS K5UXM1_PHACS K5UXM1_PHACS K5UXB1_PHACS K5UXB1_PHACS K5UWQ9_PHACS K5UWQ9_PHACS K5US82_PHACS K5US82_PHACS K5US40_PHACS K5US40_PHACS K5UQG0_PHACS K5UQG0_PHACS K5ULE2_PHACS K5ULE2_PHACS K5UK26_PHACS K5UK26_PHACS K5W0I9_PHACS K5W0I9_PHACS K5W1U7_PHACS K5W1U7_PHACS K5W227_PHACS K5W227_PHACS K5W282_PHACS K5W282_PHACS K5W4M6_PHACS K5W4M6_PHACS K5W5B9_PHACS K5W5B9_PHACS K5W688_PHACS K5W688_PHACS K5W6Z7_PHACS K5W6Z7_PHACS K5W8P9_PHACS K5W8P9_PHACS K5W900_PHACS K5W900_PHACS K5W9B5_PHACS K5W9B5_PHACS K5W9C7_PHACS K5W9C7_PHACS K5W9F7_PHACS K5W9F7_PHACS K5W9R5_PHACS K5W9R5_PHACS K5WCA4_PHACS K5WCA4_PHACS K5WDJ4_PHACS K5WDJ4_PHACS K5WF04_PHACS K5WF04_PHACS K5WFB4_PHACS K5WFB4_PHACS K5WFI8_PHACS K5WFI8_PHACS K5WH01_PHACS K5WH01_PHACS K5WI61_PHACS K5WI61_PHACS K5WIB9_PHACS K5WIB9_PHACS K5WJL7_PHACS K5WJL7_PHACS K5WMI6_PHACS K5WMI6_PHACS K5WMM8_PHACS K5WMM8_PHACS K5WMV1_PHACS K5WMV1_PHACS K5WR06_PHACS K5WR06_PHACS K5WY57_PHACS K5WY57_PHACS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
K5WUK9_PHACSGeneral transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (451 aa)
K5X3Y7_PHACSRNA_pol_L_2 domain-containing protein. (141 aa)
K5X7T4_PHACSWD_REPEATS_REGION domain-containing protein. (140 aa)
K5X9H4_PHACSMIF4G domain-containing protein. (869 aa)
K5XDK4_PHACSUncharacterized protein. (801 aa)
K5XE76_PHACSDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1237 aa)
K5XEG5_PHACSUncharacterized protein. (1899 aa)
K5VZE3_PHACSTranscription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (113 aa)
K5VYN6_PHACSUncharacterized protein. (94 aa)
K5VX46_PHACSTAFII28 domain-containing protein. (129 aa)
K5VVR7_PHACSUncharacterized protein. (1070 aa)
K5VVN0_PHACSNuclear cap-binding protein subunit 2. (225 aa)
K5VVD9_PHACSUncharacterized protein. (772 aa)
K5VV23_PHACSDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (153 aa)
K5VTW9_PHACSRPOL4c domain-containing protein. (126 aa)
K5VTQ7_PHACSUncharacterized protein. (349 aa)
K5VSX6_PHACSTFIID_20kDa domain-containing protein. (264 aa)
K5VSS4_PHACSGCR1_C domain-containing protein. (198 aa)
K5VMA8_PHACSBTP domain-containing protein. (549 aa)
K5VKI9_PHACSUncharacterized protein; Belongs to the cyclin family. (344 aa)
K5VEI0_PHACSRNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (863 aa)
K5VEH8_PHACSUncharacterized protein. (1323 aa)
K5VDA5_PHACSCYCLIN domain-containing protein; Belongs to the cyclin family. (344 aa)
K5VAL5_PHACSTAF4 domain-containing protein. (481 aa)
K5V9R8_PHACSEAF domain-containing protein. (117 aa)
K5V8H2_PHACSRibosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (310 aa)
K5V741_PHACSUncharacterized protein. (320 aa)
K5V6I8_PHACSTPR_REGION domain-containing protein. (397 aa)
K5V327_PHACSTranscription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (989 aa)
K5V1V8_PHACSProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (483 aa)
K5V0W3_PHACSCDC73_C domain-containing protein. (428 aa)
K5UYY6_PHACSTranscription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1542 aa)
K5UYC8_PHACSTAFII55_N domain-containing protein. (171 aa)
K5UXM1_PHACSUncharacterized protein. (1101 aa)
K5UXB1_PHACSUncharacterized protein. (170 aa)
K5UWQ9_PHACSUncharacterized protein. (360 aa)
K5US82_PHACSUncharacterized protein. (971 aa)
K5US40_PHACSTranscription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (284 aa)
K5UQG0_PHACSTAF6_C domain-containing protein. (418 aa)
K5ULE2_PHACSTFIIS central domain-containing protein. (162 aa)
K5UK26_PHACSProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (367 aa)
K5W0I9_PHACSDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (124 aa)
K5W1U7_PHACSRNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (472 aa)
K5W227_PHACSPHD domain-containing protein. (1062 aa)
K5W282_PHACSUncharacterized protein. (64 aa)
K5W4M6_PHACSWD_REPEATS_REGION domain-containing protein. (399 aa)
K5W5B9_PHACSTFIIB-type domain-containing protein. (350 aa)
K5W688_PHACSRPOLD domain-containing protein. (399 aa)
K5W6Z7_PHACSUncharacterized protein. (159 aa)
K5W8P9_PHACSUncharacterized protein. (100 aa)
K5W900_PHACSHelicase ATP-binding domain-containing protein. (792 aa)
K5W9B5_PHACSDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1753 aa)
K5W9C7_PHACSDUF4211 domain-containing protein. (522 aa)
K5W9F7_PHACSUncharacterized protein. (620 aa)
K5W9R5_PHACSUncharacterized protein. (321 aa)
K5WCA4_PHACSUncharacterized protein. (543 aa)
K5WDJ4_PHACSPlus3 domain-containing protein. (522 aa)
K5WF04_PHACSHTH TFE/IIEalpha-type domain-containing protein. (491 aa)
K5WFB4_PHACSUncharacterized protein. (208 aa)
K5WFI8_PHACSUncharacterized protein. (835 aa)
K5WH01_PHACSUncharacterized protein. (505 aa)
K5WI61_PHACSTranscription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (707 aa)
K5WIB9_PHACSTranscription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (160 aa)
K5WJL7_PHACSUncharacterized protein. (542 aa)
K5WMI6_PHACSPHD-type domain-containing protein. (823 aa)
K5WMM8_PHACSBTB domain-containing protein. (894 aa)
K5WMV1_PHACSFACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (508 aa)
K5WR06_PHACSWD_REPEATS_REGION domain-containing protein. (389 aa)
K5WY57_PHACSUncharacterized protein; Belongs to the cyclin family. (311 aa)
Your Current Organism:
Phanerochaete carnosa
NCBI taxonomy Id: 650164
Other names: P. carnosa HHB-10118-sp, Phanerochaete carnosa HHB-10118-sp
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