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gctB gctB gctA gctA gabT gabT frdC1 frdC1 frdA1 frdA1 frdB1 frdB1 fadB fadB padG1 padG1 padE1 padE1 frdC2 frdC2 frdA2 frdA2 frdB2 frdB2 ech ech hmgL hmgL acsA2 acsA2 atoB atoB hbd hbd korB korB korA korA CCK78921.1 CCK78921.1 oadB oadB CCK79225.1 CCK79225.1 CCK79306.1 CCK79306.1 korB2 korB2 korA2 korA2 gctA2 gctA2 gctB2 gctB2 crt crt ilvH ilvH ilvG ilvG gctA3 gctA3 atoD atoD crt2 crt2 CCK80405.1 CCK80405.1 mvaB mvaB hpaB hpaB korB3 korB3 korA3 korA3 korA4 korA4 korB4 korB4 thlA thlA cat1 cat1 CCK81851.1 CCK81851.1 phbC phbC phaE phaE CCK81979.1 CCK81979.1 nifJ nifJ porA porA porB porB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gctBGctB: Glutaconate CoA-transferase, subunit B. (253 aa)
gctAGctA: Glutaconate CoA-transferase, subunit A. (325 aa)
gabTGabT: 4-aminobutyrate aminotransferase (Gamma-amino-N-butyrate transaminase); Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (435 aa)
frdC1FrdC1: fumarate reductase, cytochrome b subunit. (313 aa)
frdA1FrdA1: fumarate reductase, flavoprotein subunit. (656 aa)
frdB1FrdB1: fumarate reducatse, iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (243 aa)
fadBFadB: 3-hydroxyacyl-CoA dehydrogenase, NAD-binding. (802 aa)
padG1PadG1: phenylglyoxylate:acceptor oxidoreductase, subunit G. (403 aa)
padE1PadE1: phenylglyoxylate:acceptor oxidoreductase, subunit E. (182 aa)
frdC2FrdC2: fumarate reductase, cytochrome b subunit. (307 aa)
frdA2FrdA2: fumarate reductase, flavoprotein subunit. (656 aa)
frdB2FrdB2: fumarate reductase, iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (244 aa)
echEch: enoyl-CoA hydratase/isomerase; Signal peptide. (243 aa)
hmgLHmgL: predicted hydroxymethylglutaryl-CoA lyase. (374 aa)
acsA2AcsA2: acetoacetyl-CoA synthetase. (649 aa)
atoBAtoB: acetyl-CoA acetyltransferase (acetoacetyl-CoA thiolase); Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
hbdHbd: 3-hydroxybutyryl-CoA dehyrogenase. (283 aa)
korBKorB: 2-oxoglutarate synthase, beta subunit (2-ketoglutarate oxidoreductase beta chain). (245 aa)
korAKorA: 2-oxoglutarate synthase, alpha subunit (2-ketoglutarate oxidoreductase alpha chain). (355 aa)
CCK78921.14-hydroxybutyrate CoA-transferase. (620 aa)
oadBOadB: oxaloacetate decarboxylase, beta chain. (375 aa)
CCK79225.1Pyridoxal-dependent decarboxylase family protein. (542 aa)
CCK79306.1Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (388 aa)
korB2KorB2: 2-oxoglutarate synthase, subunit B. (431 aa)
korA2KorA2: 2-oxoglutarate synthase, subunit A. (375 aa)
gctA2GctA2: glutaconate CoA-transferase, subunit A. (325 aa)
gctB2GctB2: glutaconate CoA-transferase, subunit B. (256 aa)
crtCrt: 3-hydroxybutyryl-CoA dehydrogenase (crotonase). (254 aa)
ilvHIlvH: acetolyctate synthase, small subunit 2.2.1.6. (163 aa)
ilvGIlgV: acetolactate synthase, large subunit. (563 aa)
gctA3GctA3: glutaconate CoA-transferase, subunit A. (256 aa)
atoDAtoD: acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit. (330 aa)
crt2Crt2: 3-hydroxybutyryl-CoA dehydrogenase (crotonase); Belongs to the enoyl-CoA hydratase/isomerase family. (262 aa)
CCK80405.1acetyl-CoA hydrolase/transferase family protein. (635 aa)
mvaBMvaB: hydroxymehtylglutaryl-CoA lyase. (310 aa)
hpaBHpaB: predicted 4-hydroxyphenylacetate 3-hydroxylase. (478 aa)
korB3KorB3: 2-oxoglutarate synthase, subunit B. (268 aa)
korA3KorA3: 2-oxoglutarate synthase, alpha subunit. (586 aa)
korA4KorA4: 2-oxoglutarate synthase, alpha subunit. (384 aa)
korB4KorB4: 2-oxoglutarate synthase, beta subunit. (274 aa)
thlAThlA: acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (428 aa)
cat1Cat1: predicted succinyl-CoA:acetate CoA transferase. (623 aa)
CCK81851.1MaoC domain protein dehydratase. (154 aa)
phbCPhbC: poly-beta-hydroxybutyrate polymerase. (397 aa)
phaEPhaE: putative poly(3-hydroxyalkanoate) synthase component. (295 aa)
CCK81979.1Carboxyl transferase. (577 aa)
nifJNifJ: pyruvate-flavodoxin oxidoreductase. (1172 aa)
porAPorA: pyruvate synthase, alpha subunit. (381 aa)
porBPorB: pyruvate synthase, beta subunit. (298 aa)
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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