16 items (Pseudomonas cedrina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

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gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SDR89980.1	Hpt domain-containing protein. (276 aa)
	SDS08438.1	Multi-sensor hybrid histidine kinase. (641 aa)
	SDS19334.1	Two-component system, NarL family, sensor histidine kinase EvgS. (1211 aa)
	SDS22646.1	Signal transduction histidine kinase. (633 aa)
	SDS30358.1	Signal transduction histidine kinase. (456 aa)
	SDS33300.1	PAS domain S-box-containing protein. (498 aa)
	SDS33787.1	Two-component system, NarL family, sensor histidine kinase EvgS. (1207 aa)
	SDS53399.1	His Kinase A (phospho-acceptor) domain-containing protein. (726 aa)
	SDS58501.1	PAS domain S-box-containing protein. (533 aa)
	SDS59498.1	Signal transduction histidine kinase. (800 aa)
	SDS72017.1	Signal transduction histidine kinase. (446 aa)
	SDS87587.1	PAS domain S-box-containing protein. (831 aa)
	SDS88490.1	Signal transduction histidine kinase. (570 aa)
	SDT22989.1	Na+/proline symporter. (1156 aa)
	SDT48226.1	PAS domain S-box-containing protein. (664 aa)
	SDT50167.1	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (701 aa)

Your Current Organism:

Pseudomonas cedrina

NCBI taxonomy Id: 651740
Other names: CFML 96-198, CIP 105541, DSM 17516, P. cedrina, Pseudomonas cedrella, Pseudomonas cedrina corrig. Dabboussi et al. 2002 emend. Behrendt et al. 2009, Pseudomonas sp. H-R, Pseudomonas sp. HG-K2, Pseudomonas sp. LB-C, Pseudomonas sp. LB-Z10, Pseudomonas sp. LB-Z3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SDR89980.1	SDS08438.1	SAMN04490182_0254	SAMN04490182_0698	Hpt domain-containing protein.	Multi-sensor hybrid histidine kinase.	0.999
SDR89980.1	SDS19334.1	SAMN04490182_0254	SAMN04490182_0950	Hpt domain-containing protein.	Two-component system, NarL family, sensor histidine kinase EvgS.	0.999
SDR89980.1	SDS22646.1	SAMN04490182_0254	SAMN04490182_1030	Hpt domain-containing protein.	Signal transduction histidine kinase.	0.967
SDR89980.1	SDS30358.1	SAMN04490182_0254	SAMN04490182_1223	Hpt domain-containing protein.	Signal transduction histidine kinase.	0.999
SDR89980.1	SDS33300.1	SAMN04490182_0254	SAMN04490182_1293	Hpt domain-containing protein.	PAS domain S-box-containing protein.	0.999
SDR89980.1	SDS33787.1	SAMN04490182_0254	SAMN04490182_1304	Hpt domain-containing protein.	Two-component system, NarL family, sensor histidine kinase EvgS.	0.999
SDR89980.1	SDS53399.1	SAMN04490182_0254	SAMN04490182_1759	Hpt domain-containing protein.	His Kinase A (phospho-acceptor) domain-containing protein.	0.994
SDR89980.1	SDS58501.1	SAMN04490182_0254	SAMN04490182_1881	Hpt domain-containing protein.	PAS domain S-box-containing protein.	0.999
SDR89980.1	SDS59498.1	SAMN04490182_0254	SAMN04490182_1905	Hpt domain-containing protein.	Signal transduction histidine kinase.	0.999
SDR89980.1	SDS72017.1	SAMN04490182_0254	SAMN04490182_2216	Hpt domain-containing protein.	Signal transduction histidine kinase.	0.999
SDR89980.1	SDS87587.1	SAMN04490182_0254	SAMN04490182_2637	Hpt domain-containing protein.	PAS domain S-box-containing protein.	0.999
SDR89980.1	SDS88490.1	SAMN04490182_0254	SAMN04490182_2662	Hpt domain-containing protein.	Signal transduction histidine kinase.	0.998
SDR89980.1	SDT22989.1	SAMN04490182_0254	SAMN04490182_3709	Hpt domain-containing protein.	Na+/proline symporter.	0.999
SDR89980.1	SDT48226.1	SAMN04490182_0254	SAMN04490182_4893	Hpt domain-containing protein.	PAS domain S-box-containing protein.	0.995
SDR89980.1	SDT50167.1	SAMN04490182_0254	SAMN04490182_5023	Hpt domain-containing protein.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.988
SDS08438.1	SDR89980.1	SAMN04490182_0698	SAMN04490182_0254	Multi-sensor hybrid histidine kinase.	Hpt domain-containing protein.	0.999
SDS08438.1	SDS19334.1	SAMN04490182_0698	SAMN04490182_0950	Multi-sensor hybrid histidine kinase.	Two-component system, NarL family, sensor histidine kinase EvgS.	0.999
SDS08438.1	SDS22646.1	SAMN04490182_0698	SAMN04490182_1030	Multi-sensor hybrid histidine kinase.	Signal transduction histidine kinase.	0.998
SDS08438.1	SDS30358.1	SAMN04490182_0698	SAMN04490182_1223	Multi-sensor hybrid histidine kinase.	Signal transduction histidine kinase.	0.999
SDS08438.1	SDS33300.1	SAMN04490182_0698	SAMN04490182_1293	Multi-sensor hybrid histidine kinase.	PAS domain S-box-containing protein.	0.999

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