STRINGSTRING
SDS46062.1 SDS46062.1 gyrB gyrB SDT57177.1 SDT57177.1 SDT58408.1 SDT58408.1 SDT60902.1 SDT60902.1 SDT61293.1 SDT61293.1 SDT62046.1 SDT62046.1 parE parE SDT65018.1 SDT65018.1 SDT65239.1 SDT65239.1 SDT29256.1 SDT29256.1 SDT29174.1 SDT29174.1 SDT22989.1 SDT22989.1 SDT22200.1 SDT22200.1 SDT21951.1 SDT21951.1 SDR82321.1 SDR82321.1 SDR87387.1 SDR87387.1 SDR93576.1 SDR93576.1 SDR93597.1 SDR93597.1 SDR94279.1 SDR94279.1 SDR94468.1 SDR94468.1 SDR97712.1 SDR97712.1 SDS07397.1 SDS07397.1 SDS16628.1 SDS16628.1 SDS19182.1 SDS19182.1 htpG htpG SDS22646.1 SDS22646.1 SDS23160.1 SDS23160.1 SDS29285.1 SDS29285.1 SDT55323.1 SDT55323.1 SDS51799.1 SDS51799.1 SDS53399.1 SDS53399.1 SDS58501.1 SDS58501.1 SDS69606.1 SDS69606.1 SDS69732.1 SDS69732.1 SDS69862.1 SDS69862.1 SDS83861.1 SDS83861.1 SDS87587.1 SDS87587.1 SDS88490.1 SDS88490.1 SDS91762.1 SDS91762.1 SDS95684.1 SDS95684.1 SDT13020.1 SDT13020.1 SDT20488.1 SDT20488.1 SDT20986.1 SDT20986.1 SDT21289.1 SDT21289.1 SDT32872.1 SDT32872.1 SDT33906.1 SDT33906.1 SDT34519.1 SDT34519.1 SDT34707.1 SDT34707.1 SDT35163.1 SDT35163.1 SDT37975.1 SDT37975.1 SDT40417.1 SDT40417.1 SDT44891.1 SDT44891.1 SDT49314.1 SDT49314.1 SDT50942.1 SDT50942.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SDS46062.1Signal transduction histidine kinase. (464 aa)
gyrBDNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (805 aa)
SDT57177.1Sensor domain CHASE2-containing protein. (759 aa)
SDT58408.1Two-component system, NtrC family, sensor histidine kinase KinB. (595 aa)
SDT60902.1Osmolarity sensor protein envZ. (437 aa)
SDT61293.1Two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB. (602 aa)
SDT62046.1Nitrogen regulation protein NR(II); PAS/PAC sensor signal transduction histidine kinase /signal transduction histidine kinase, nitrogen specific, NtrB. (361 aa)
parEDNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (634 aa)
SDT65018.1Signal transduction histidine kinase. (924 aa)
SDT65239.1PAS domain S-box-containing protein. (908 aa)
SDT29256.1Two-component system, OmpR family, sensor histidine kinase RstB. (536 aa)
SDT29174.1Two-component system, OmpR family, sensor histidine kinase PhoQ. (448 aa)
SDT22989.1Na+/proline symporter. (1156 aa)
SDT22200.1Two-component system, sensor histidine kinase FlrB. (404 aa)
SDT21951.1Histidine kinase-like ATPase domain-containing protein. (571 aa)
SDR82321.1Two-component system, sensor histidine kinase RegB. (420 aa)
SDR87387.1Two-component system, OmpR family, heavy metal sensor histidine kinase CusS; Member of a two-component regulatory system. (454 aa)
SDR93576.1Response regulator receiver domain-containing protein. (459 aa)
SDR93597.1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (604 aa)
SDR94279.1Signal transduction histidine kinase. (589 aa)
SDR94468.1Two-component system, sensor histidine kinase AauS. (633 aa)
SDR97712.1Two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE. (758 aa)
SDS07397.1Two-component system, OmpR family, sensor histidine kinase TctE. (462 aa)
SDS16628.1Two-component system, OmpR family, sensor histidine kinase KdpD. (883 aa)
SDS19182.1Signal transduction histidine kinase. (795 aa)
htpGMolecular chaperone HtpG; Molecular chaperone. Has ATPase activity. (634 aa)
SDS22646.1Signal transduction histidine kinase. (633 aa)
SDS23160.1Signal transduction histidine kinase. (345 aa)
SDS29285.1Signal transduction histidine kinase. (437 aa)
SDT55323.1PAS/PAC sensor signal transduction histidine kinase. (440 aa)
SDS51799.1Two-component system, OmpR family, sensor kinase. (433 aa)
SDS53399.1His Kinase A (phospho-acceptor) domain-containing protein. (726 aa)
SDS58501.1PAS domain S-box-containing protein. (533 aa)
SDS69606.1Signal transduction histidine kinase. (1165 aa)
SDS69732.1Signal transduction histidine kinase. (397 aa)
SDS69862.1His Kinase A (phospho-acceptor) domain-containing protein. (559 aa)
SDS83861.1Two-component system, OmpR family, sensor kinase ParS. (425 aa)
SDS87587.1PAS domain S-box-containing protein. (831 aa)
SDS88490.1Signal transduction histidine kinase. (570 aa)
SDS91762.1PAS domain S-box-containing protein. (380 aa)
SDS95684.1Two-component system, NarL family, sensor histidine kinase BarA. (917 aa)
SDT13020.1Two-component system, OmpR family, heavy metal sensor histidine kinase CusS; Member of a two-component regulatory system. (466 aa)
SDT20488.1Signal transduction histidine kinase. (439 aa)
SDT20986.1Signal transduction histidine kinase; Manually curated. (334 aa)
SDT21289.1Two-component system, chemotaxis family, sensor kinase CheA. (740 aa)
SDT32872.1Signal transduction histidine kinase. (447 aa)
SDT33906.1PAS domain S-box-containing protein. (678 aa)
SDT34519.1Two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB. (588 aa)
SDT34707.1Signal transduction histidine kinase. (489 aa)
SDT35163.1Signal transduction histidine kinase. (426 aa)
SDT37975.1Bacteriophytochrome (light-regulated signal transduction histidine kinase). (747 aa)
SDT40417.1PAS domain S-box-containing protein. (984 aa)
SDT44891.1Signal transduction histidine kinase. (796 aa)
SDT49314.1Two-component system, OmpR family, sensor histidine kinase CreC. (479 aa)
SDT50942.1Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator). (1939 aa)
Your Current Organism:
Pseudomonas cedrina
NCBI taxonomy Id: 651740
Other names: CFML 96-198, CIP 105541, DSM 17516, P. cedrina, Pseudomonas cedrella, Pseudomonas cedrina corrig. Dabboussi et al. 2002 emend. Behrendt et al. 2009, Pseudomonas sp. H-R, Pseudomonas sp. HG-K2, Pseudomonas sp. LB-C, Pseudomonas sp. LB-Z10, Pseudomonas sp. LB-Z3
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