STRINGSTRING
SDT34541.1 SDT34541.1 SDT34732.1 SDT34732.1 SDT35188.1 SDT35188.1 SDT37933.1 SDT37933.1 SDT40439.1 SDT40439.1 SDT44891.1 SDT44891.1 SDT49123.1 SDT49123.1 SDT49329.1 SDT49329.1 SDT50167.1 SDT50167.1 SDT50942.1 SDT50942.1 SDT50996.1 SDT50996.1 SDT51012.1 SDT51012.1 SDT53760.1 SDT53760.1 phoB phoB SDT55378.1 SDT55378.1 SDT57151.1 SDT57151.1 SDT58421.1 SDT58421.1 SDT60888.1 SDT60888.1 SDT61280.1 SDT61280.1 ntrC ntrC SDT65018.1 SDT65018.1 SDT65123.1 SDT65123.1 SDT65262.1 SDT65262.1 SDT65346.1 SDT65346.1 SDT20519.1 SDT20519.1 SDR82387.1 SDR82387.1 SDR87441.1 SDR87441.1 SDR87762.1 SDR87762.1 SDR90037.1 SDR90037.1 SDR93576.1 SDR93576.1 SDR93683.1 SDR93683.1 SDR94314.1 SDR94314.1 SDR94428.1 SDR94428.1 SDR95386.1 SDR95386.1 SDR96491.1 SDR96491.1 SDR97712.1 SDR97712.1 cheB cheB SDR97790.1 SDR97790.1 SDS07312.1 SDS07312.1 SDS12430.1 SDS12430.1 SDS16699.1 SDS16699.1 SDS19182.1 SDS19182.1 SDS19373.1 SDS19373.1 SDS19415.1 SDS19415.1 SDS22646.1 SDS22646.1 SDS23207.1 SDS23207.1 SDS29261.1 SDS29261.1 SDS33742.1 SDS33742.1 SDS34104.1 SDS34104.1 SDS46105.1 SDS46105.1 SDS51753.1 SDS51753.1 SDS53399.1 SDS53399.1 SDS58501.1 SDS58501.1 SDS69572.1 SDS69572.1 SDS69606.1 SDS69606.1 SDS69732.1 SDS69732.1 SDS69772.1 SDS69772.1 SDS69862.1 SDS69862.1 SDS83897.1 SDS83897.1 SDS87587.1 SDS87587.1 SDS88490.1 SDS88490.1 SDS95684.1 SDS95684.1 SDT12984.1 SDT12984.1 SDT20938.1 SDT20938.1 SDT21031.1 SDT21031.1 cheB-2 cheB-2 SDT21356.1 SDT21356.1 SDT21951.1 SDT21951.1 SDT22168.1 SDT22168.1 SDT22236.1 SDT22236.1 SDT22989.1 SDT22989.1 SDT26571.1 SDT26571.1 SDT29193.1 SDT29193.1 SDT29280.1 SDT29280.1 SDT29487.1 SDT29487.1 SDT32824.1 SDT32824.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SDT34541.1Two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD. (441 aa)
SDT34732.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (244 aa)
SDT35188.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (227 aa)
SDT37933.1Response regulator receiver domain-containing protein. (126 aa)
SDT40439.1DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains. (476 aa)
SDT44891.1Signal transduction histidine kinase. (796 aa)
SDT49123.1Response regulator receiver domain-containing protein. (148 aa)
SDT49329.1Two-component system, OmpR family, catabolic regulation response regulator CreB. (222 aa)
SDT50167.1PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (701 aa)
SDT50942.1Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator). (1939 aa)
SDT50996.1Twitching motility two-component system response regulator PilH. (121 aa)
SDT51012.1Twitching motility two-component system response regulator PilG. (135 aa)
SDT53760.1Two component transcriptional regulator, LytTR family. (248 aa)
phoBTwo component transcriptional regulator, winged helix family. (229 aa)
SDT55378.1Response regulator receiver domain-containing protein. (303 aa)
SDT57151.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (240 aa)
SDT58421.1Two-component response regulator AlgB. (448 aa)
SDT60888.1Two-component response regulator OmpR. (246 aa)
SDT61280.1Two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD. (458 aa)
ntrCNitrogen metabolism transcriptional regulator, NtrC, Fis family; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (478 aa)
SDT65018.1Signal transduction histidine kinase. (924 aa)
SDT65123.1Diguanylate cyclase (GGDEF) domain-containing protein. (556 aa)
SDT65262.1DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. (297 aa)
SDT65346.1Response regulator receiver domain-containing protein. (134 aa)
SDT20519.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (226 aa)
SDR82387.1Two component transcriptional regulator, Fis family. (186 aa)
SDR87441.1Two component heavy metal response transcriptional regulator, winged helix family. (230 aa)
SDR87762.1Two-component system, chemotaxis family, response regulator CheV. (299 aa)
SDR90037.1Two component transcriptional regulator, LuxR family. (211 aa)
SDR93576.1Response regulator receiver domain-containing protein. (459 aa)
SDR93683.1Response regulator c-di-GMP phosphodiesterase, RpfG family, contains REC and HD-GYP domains. (440 aa)
SDR94314.1DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains. (465 aa)
SDR94428.1Two-component system, response regulator AauR. (449 aa)
SDR95386.1Two component transcriptional regulator, LuxR family. (210 aa)
SDR96491.1DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. (216 aa)
SDR97712.1Two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE. (758 aa)
cheBTwo-component system, chemotaxis family, response regulator WspF; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (336 aa)
SDR97790.1Response regulator receiver modulated diguanylate cyclase. (333 aa)
SDS07312.1Two component transcriptional regulator, winged helix family. (223 aa)
SDS12430.1Serine phosphatase RsbU, regulator of sigma subunit. (393 aa)
SDS16699.1Two component transcriptional regulator, winged helix family. (229 aa)
SDS19182.1Signal transduction histidine kinase. (795 aa)
SDS19373.1Two component transcriptional regulator, LuxR family. (208 aa)
SDS19415.1Response regulator receiver domain-containing protein. (133 aa)
SDS22646.1Signal transduction histidine kinase. (633 aa)
SDS23207.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (271 aa)
SDS29261.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (222 aa)
SDS33742.1Two component transcriptional regulator, LuxR family. (208 aa)
SDS34104.1DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains; Manually curated. (213 aa)
SDS46105.1Two-component system, OmpR family, response regulator. (227 aa)
SDS51753.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (233 aa)
SDS53399.1His Kinase A (phospho-acceptor) domain-containing protein. (726 aa)
SDS58501.1PAS domain S-box-containing protein. (533 aa)
SDS69572.1Response regulator receiver domain-containing protein. (119 aa)
SDS69606.1Signal transduction histidine kinase. (1165 aa)
SDS69732.1Signal transduction histidine kinase. (397 aa)
SDS69772.1Response regulator receiver domain-containing protein. (125 aa)
SDS69862.1His Kinase A (phospho-acceptor) domain-containing protein. (559 aa)
SDS83897.1Two-component system, OmpR family, response regulator ParR. (235 aa)
SDS87587.1PAS domain S-box-containing protein. (831 aa)
SDS88490.1Signal transduction histidine kinase. (570 aa)
SDS95684.1Two-component system, NarL family, sensor histidine kinase BarA. (917 aa)
SDT12984.1Two component heavy metal response transcriptional regulator, winged helix family. (223 aa)
SDT20938.1CheW protein. (312 aa)
SDT21031.1DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. (219 aa)
cheB-2Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (376 aa)
SDT21356.1Two-component system, chemotaxis family, response regulator CheY. (124 aa)
SDT21951.1Histidine kinase-like ATPase domain-containing protein. (571 aa)
SDT22168.1Two-component system, response regulator FlrC. (458 aa)
SDT22236.1Sigma-54 specific transcriptional regulator, flagellar regulatory protein A. (491 aa)
SDT22989.1Na+/proline symporter. (1156 aa)
SDT26571.1Response regulator receiver and ANTAR domain protein. (191 aa)
SDT29193.1Two component transcriptional regulator, winged helix family. (225 aa)
SDT29280.1Two-component system, OmpR family, response regulator RstA. (241 aa)
SDT29487.1CheW protein. (310 aa)
SDT32824.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (225 aa)
Your Current Organism:
Pseudomonas cedrina
NCBI taxonomy Id: 651740
Other names: CFML 96-198, CIP 105541, DSM 17516, P. cedrina, Pseudomonas cedrella, Pseudomonas cedrina corrig. Dabboussi et al. 2002 emend. Behrendt et al. 2009, Pseudomonas sp. H-R, Pseudomonas sp. HG-K2, Pseudomonas sp. LB-C, Pseudomonas sp. LB-Z10, Pseudomonas sp. LB-Z3
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