27 items (Pseudomonas cedrina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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protein homology

Your Input:
	SDR87612.1	Lysine/arginine/ornithine transport system substrate-binding protein. (256 aa)
	SDR89274.1	Amino acid ABC transporter substrate-binding protein, PAAT family. (343 aa)
	SDR94677.1	Glutamate/aspartate transport system substrate-binding protein. (308 aa)
	SDS01818.1	Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family. (259 aa)
	SDS09645.1	Cyclohexadienyl dehydratase. (256 aa)
	SDS19334.1	Two-component system, NarL family, sensor histidine kinase EvgS. (1211 aa)
	SDS33787.1	Two-component system, NarL family, sensor histidine kinase EvgS. (1207 aa)
	SDS55162.1	Amino acid ABC transporter substrate-binding protein, PAAT family. (273 aa)
	SDS55198.1	Amino acid ABC transporter substrate-binding protein, PAAT family. (268 aa)
	SDS78854.1	Amino acid ABC transporter substrate-binding protein, PAAT family. (256 aa)
	SDS83627.1	Amino acid ABC transporter substrate-binding protein, PAAT family. (276 aa)
	SDS87905.1	Amino acid ABC transporter substrate-binding protein, PAAT family. (282 aa)
	SDS92920.1	Sulfonate transport system substrate-binding protein. (312 aa)
	SDT30166.1	Arginine/ornithine transport system substrate-binding protein. (261 aa)
	mltF	Membrane-bound lytic murein transglycosylase F; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. (553 aa)
	SDT48226.1	PAS domain S-box-containing protein. (664 aa)
	SDT48619.1	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (1247 aa)
	SDT50667.1	Glutamate/aspartate transport system substrate-binding protein. (300 aa)
	SDT52721.1	Sulfonate transport system substrate-binding protein. (323 aa)
	SDT53288.1	Amino acid ABC transporter substrate-binding protein, PAAT family. (261 aa)
	SDT55789.1	Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family. (273 aa)
	SDT60288.1	Amino acid ABC transporter substrate-binding protein, PAAT family. (283 aa)
	SDT60536.1	Cystine transport system substrate-binding protein. (264 aa)
	tauA	Taurine transport system substrate-binding protein. (325 aa)
	SDT61652.1	Polar amino acid transport system substrate-binding protein. (250 aa)
	SDT62432.1	Polar amino acid transport system substrate-binding protein. (266 aa)
	SDT62439.1	Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family. (266 aa)

Your Current Organism:

Pseudomonas cedrina

NCBI taxonomy Id: 651740
Other names: CFML 96-198, CIP 105541, DSM 17516, P. cedrina, Pseudomonas cedrella, Pseudomonas cedrina corrig. Dabboussi et al. 2002 emend. Behrendt et al. 2009, Pseudomonas sp. H-R, Pseudomonas sp. HG-K2, Pseudomonas sp. LB-C, Pseudomonas sp. LB-Z10, Pseudomonas sp. LB-Z3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SDR87612.1	SDS19334.1	SAMN04490182_0197	SAMN04490182_0950	Lysine/arginine/ornithine transport system substrate-binding protein.	Two-component system, NarL family, sensor histidine kinase EvgS.	0.615
SDR87612.1	SDS33787.1	SAMN04490182_0197	SAMN04490182_1304	Lysine/arginine/ornithine transport system substrate-binding protein.	Two-component system, NarL family, sensor histidine kinase EvgS.	0.615
SDR87612.1	SDT55789.1	SAMN04490182_0197	SAMN04490182_5406	Lysine/arginine/ornithine transport system substrate-binding protein.	Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.	0.691
SDR87612.1	SDT62439.1	SAMN04490182_0197	SAMN04490182_5883	Lysine/arginine/ornithine transport system substrate-binding protein.	Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.	0.463
SDR89274.1	SDS19334.1	SAMN04490182_0236	SAMN04490182_0950	Amino acid ABC transporter substrate-binding protein, PAAT family.	Two-component system, NarL family, sensor histidine kinase EvgS.	0.615
SDR89274.1	SDS33787.1	SAMN04490182_0236	SAMN04490182_1304	Amino acid ABC transporter substrate-binding protein, PAAT family.	Two-component system, NarL family, sensor histidine kinase EvgS.	0.615
SDR94677.1	SDS19334.1	SAMN04490182_0368	SAMN04490182_0950	Glutamate/aspartate transport system substrate-binding protein.	Two-component system, NarL family, sensor histidine kinase EvgS.	0.615
SDR94677.1	SDS33787.1	SAMN04490182_0368	SAMN04490182_1304	Glutamate/aspartate transport system substrate-binding protein.	Two-component system, NarL family, sensor histidine kinase EvgS.	0.615
SDS01818.1	SDS19334.1	SAMN04490182_0542	SAMN04490182_0950	Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.	Two-component system, NarL family, sensor histidine kinase EvgS.	0.615
SDS01818.1	SDS33787.1	SAMN04490182_0542	SAMN04490182_1304	Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.	Two-component system, NarL family, sensor histidine kinase EvgS.	0.615
SDS09645.1	SDS19334.1	SAMN04490182_0725	SAMN04490182_0950	Cyclohexadienyl dehydratase.	Two-component system, NarL family, sensor histidine kinase EvgS.	0.615
SDS09645.1	SDS33787.1	SAMN04490182_0725	SAMN04490182_1304	Cyclohexadienyl dehydratase.	Two-component system, NarL family, sensor histidine kinase EvgS.	0.615
SDS09645.1	SDS83627.1	SAMN04490182_0725	SAMN04490182_2529	Cyclohexadienyl dehydratase.	Amino acid ABC transporter substrate-binding protein, PAAT family.	0.412
SDS19334.1	SDR87612.1	SAMN04490182_0950	SAMN04490182_0197	Two-component system, NarL family, sensor histidine kinase EvgS.	Lysine/arginine/ornithine transport system substrate-binding protein.	0.615
SDS19334.1	SDR89274.1	SAMN04490182_0950	SAMN04490182_0236	Two-component system, NarL family, sensor histidine kinase EvgS.	Amino acid ABC transporter substrate-binding protein, PAAT family.	0.615
SDS19334.1	SDR94677.1	SAMN04490182_0950	SAMN04490182_0368	Two-component system, NarL family, sensor histidine kinase EvgS.	Glutamate/aspartate transport system substrate-binding protein.	0.615
SDS19334.1	SDS01818.1	SAMN04490182_0950	SAMN04490182_0542	Two-component system, NarL family, sensor histidine kinase EvgS.	Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.	0.615
SDS19334.1	SDS09645.1	SAMN04490182_0950	SAMN04490182_0725	Two-component system, NarL family, sensor histidine kinase EvgS.	Cyclohexadienyl dehydratase.	0.615
SDS19334.1	SDS33787.1	SAMN04490182_0950	SAMN04490182_1304	Two-component system, NarL family, sensor histidine kinase EvgS.	Two-component system, NarL family, sensor histidine kinase EvgS.	0.999
SDS19334.1	SDS55162.1	SAMN04490182_0950	SAMN04490182_1804	Two-component system, NarL family, sensor histidine kinase EvgS.	Amino acid ABC transporter substrate-binding protein, PAAT family.	0.615

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