64 items (Pseudomonas cedrina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SDR82321.1	Two-component system, sensor histidine kinase RegB. (420 aa)
	SDR87387.1	Two-component system, OmpR family, heavy metal sensor histidine kinase CusS; Member of a two-component regulatory system. (454 aa)
	SDR93576.1	Response regulator receiver domain-containing protein. (459 aa)
	SDR94279.1	Signal transduction histidine kinase. (589 aa)
	SDR94468.1	Two-component system, sensor histidine kinase AauS. (633 aa)
	SDS01590.1	Signal transduction histidine kinase. (382 aa)
	SDS07397.1	Two-component system, OmpR family, sensor histidine kinase TctE. (462 aa)
	SDS08438.1	Multi-sensor hybrid histidine kinase. (641 aa)
	SDS08479.1	Histidine kinase. (287 aa)
	SDS16628.1	Two-component system, OmpR family, sensor histidine kinase KdpD. (883 aa)
	SDS19182.1	Signal transduction histidine kinase. (795 aa)
	SDS19334.1	Two-component system, NarL family, sensor histidine kinase EvgS. (1211 aa)
	SDS22646.1	Signal transduction histidine kinase. (633 aa)
	SDS23160.1	Signal transduction histidine kinase. (345 aa)
	SDS27912.1	Bacteriophytochrome (light-regulated signal transduction histidine kinase). (736 aa)
	SDS29285.1	Signal transduction histidine kinase. (437 aa)
	SDS29750.1	PAS domain S-box-containing protein. (651 aa)
	SDS30358.1	Signal transduction histidine kinase. (456 aa)
	SDS33787.1	Two-component system, NarL family, sensor histidine kinase EvgS. (1207 aa)
	SDS46062.1	Signal transduction histidine kinase. (464 aa)
	SDS51799.1	Two-component system, OmpR family, sensor kinase. (433 aa)
	SDS53399.1	His Kinase A (phospho-acceptor) domain-containing protein. (726 aa)
	SDS54630.1	Signal transduction histidine kinase. (450 aa)
	SDS57524.1	PAS domain S-box-containing protein. (771 aa)
	SDS58045.1	Two-component system, chemotaxis family, CheB/CheR fusion protein. (1380 aa)
	SDS58501.1	PAS domain S-box-containing protein. (533 aa)
	SDS59498.1	Signal transduction histidine kinase. (800 aa)
	SDS69606.1	Signal transduction histidine kinase. (1165 aa)
	SDS69732.1	Signal transduction histidine kinase. (397 aa)
	SDS69862.1	His Kinase A (phospho-acceptor) domain-containing protein. (559 aa)
	SDS72017.1	Signal transduction histidine kinase. (446 aa)
	SDS74611.1	Two-component system, OmpR family, sensor histidine kinase AdeS. (363 aa)
	SDS82888.1	Signal transduction histidine kinase. (374 aa)
	SDS83861.1	Two-component system, OmpR family, sensor kinase ParS. (425 aa)
	SDS87587.1	PAS domain S-box-containing protein. (831 aa)
	SDS88490.1	Signal transduction histidine kinase. (570 aa)
	SDS91762.1	PAS domain S-box-containing protein. (380 aa)
	SDS95684.1	Two-component system, NarL family, sensor histidine kinase BarA. (917 aa)
	SDT13020.1	Two-component system, OmpR family, heavy metal sensor histidine kinase CusS; Member of a two-component regulatory system. (466 aa)
	SDT20488.1	Signal transduction histidine kinase. (439 aa)
	SDT22200.1	Two-component system, sensor histidine kinase FlrB. (404 aa)
	SDT22989.1	Na+/proline symporter. (1156 aa)
	SDT29174.1	Two-component system, OmpR family, sensor histidine kinase PhoQ. (448 aa)
	SDT29256.1	Two-component system, OmpR family, sensor histidine kinase RstB. (536 aa)
	SDT32872.1	Signal transduction histidine kinase. (447 aa)
	SDT33906.1	PAS domain S-box-containing protein. (678 aa)
	SDT34519.1	Two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB. (588 aa)
	SDT34707.1	Signal transduction histidine kinase. (489 aa)
	SDT35163.1	Signal transduction histidine kinase. (426 aa)
	SDT36170.1	Hypothetical protein. (89 aa)
	SDT37975.1	Bacteriophytochrome (light-regulated signal transduction histidine kinase). (747 aa)
	SDT37995.1	Signal transduction histidine kinase. (439 aa)
	SDT40417.1	PAS domain S-box-containing protein. (984 aa)
	SDT44891.1	Signal transduction histidine kinase. (796 aa)
	SDT48226.1	PAS domain S-box-containing protein. (664 aa)
	SDT49314.1	Two-component system, OmpR family, sensor histidine kinase CreC. (479 aa)
	SDT55323.1	PAS/PAC sensor signal transduction histidine kinase. (440 aa)
	SDT57177.1	Sensor domain CHASE2-containing protein. (759 aa)
	SDT58408.1	Two-component system, NtrC family, sensor histidine kinase KinB. (595 aa)
	SDT60902.1	Osmolarity sensor protein envZ. (437 aa)
	SDT61293.1	Two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB. (602 aa)
	SDT62046.1	Nitrogen regulation protein NR(II); PAS/PAC sensor signal transduction histidine kinase /signal transduction histidine kinase, nitrogen specific, NtrB. (361 aa)
	SDT65018.1	Signal transduction histidine kinase. (924 aa)
	SDT65239.1	PAS domain S-box-containing protein. (908 aa)

Your Current Organism:

Pseudomonas cedrina

NCBI taxonomy Id: 651740
Other names: CFML 96-198, CIP 105541, DSM 17516, P. cedrina, Pseudomonas cedrella, Pseudomonas cedrina corrig. Dabboussi et al. 2002 emend. Behrendt et al. 2009, Pseudomonas sp. H-R, Pseudomonas sp. HG-K2, Pseudomonas sp. LB-C, Pseudomonas sp. LB-Z10, Pseudomonas sp. LB-Z3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SDR82321.1	SDR93576.1	SAMN04490182_0069	SAMN04490182_0343	Two-component system, sensor histidine kinase RegB.	Response regulator receiver domain-containing protein.	0.504
SDR82321.1	SDS08438.1	SAMN04490182_0069	SAMN04490182_0698	Two-component system, sensor histidine kinase RegB.	Multi-sensor hybrid histidine kinase.	0.936
SDR82321.1	SDS19334.1	SAMN04490182_0069	SAMN04490182_0950	Two-component system, sensor histidine kinase RegB.	Two-component system, NarL family, sensor histidine kinase EvgS.	0.851
SDR82321.1	SDS27912.1	SAMN04490182_0069	SAMN04490182_1168	Two-component system, sensor histidine kinase RegB.	Bacteriophytochrome (light-regulated signal transduction histidine kinase).	0.525
SDR82321.1	SDS30358.1	SAMN04490182_0069	SAMN04490182_1223	Two-component system, sensor histidine kinase RegB.	Signal transduction histidine kinase.	0.809
SDR82321.1	SDS33787.1	SAMN04490182_0069	SAMN04490182_1304	Two-component system, sensor histidine kinase RegB.	Two-component system, NarL family, sensor histidine kinase EvgS.	0.851
SDR82321.1	SDS53399.1	SAMN04490182_0069	SAMN04490182_1759	Two-component system, sensor histidine kinase RegB.	His Kinase A (phospho-acceptor) domain-containing protein.	0.767
SDR82321.1	SDS57524.1	SAMN04490182_0069	SAMN04490182_1858	Two-component system, sensor histidine kinase RegB.	PAS domain S-box-containing protein.	0.578
SDR82321.1	SDS58045.1	SAMN04490182_0069	SAMN04490182_1871	Two-component system, sensor histidine kinase RegB.	Two-component system, chemotaxis family, CheB/CheR fusion protein.	0.949
SDR82321.1	SDS58501.1	SAMN04490182_0069	SAMN04490182_1881	Two-component system, sensor histidine kinase RegB.	PAS domain S-box-containing protein.	0.935
SDR82321.1	SDS59498.1	SAMN04490182_0069	SAMN04490182_1905	Two-component system, sensor histidine kinase RegB.	Signal transduction histidine kinase.	0.893
SDR82321.1	SDS69606.1	SAMN04490182_0069	SAMN04490182_2156	Two-component system, sensor histidine kinase RegB.	Signal transduction histidine kinase.	0.918
SDR82321.1	SDS69732.1	SAMN04490182_0069	SAMN04490182_2159	Two-component system, sensor histidine kinase RegB.	Signal transduction histidine kinase.	0.447
SDR82321.1	SDS69862.1	SAMN04490182_0069	SAMN04490182_2162	Two-component system, sensor histidine kinase RegB.	His Kinase A (phospho-acceptor) domain-containing protein.	0.787
SDR82321.1	SDS72017.1	SAMN04490182_0069	SAMN04490182_2216	Two-component system, sensor histidine kinase RegB.	Signal transduction histidine kinase.	0.789
SDR82321.1	SDS87587.1	SAMN04490182_0069	SAMN04490182_2637	Two-component system, sensor histidine kinase RegB.	PAS domain S-box-containing protein.	0.936
SDR82321.1	SDS88490.1	SAMN04490182_0069	SAMN04490182_2662	Two-component system, sensor histidine kinase RegB.	Signal transduction histidine kinase.	0.777
SDR82321.1	SDS95684.1	SAMN04490182_0069	SAMN04490182_2869	Two-component system, sensor histidine kinase RegB.	Two-component system, NarL family, sensor histidine kinase BarA.	0.902
SDR82321.1	SDT22989.1	SAMN04490182_0069	SAMN04490182_3709	Two-component system, sensor histidine kinase RegB.	Na+/proline symporter.	0.897
SDR82321.1	SDT35163.1	SAMN04490182_0069	SAMN04490182_4235	Two-component system, sensor histidine kinase RegB.	Signal transduction histidine kinase.	0.433

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