24 items (Biomphalaria glabrata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2C9JIR8	CYCLIN domain-containing protein; Belongs to the cyclin family. (358 aa)
	A0A2C9JJU0	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (432 aa)
	A0A2C9JKF8	Uncharacterized protein; Belongs to the cyclin family. (442 aa)
	A0A2C9JLJ6	Uncharacterized protein. (290 aa)
	A0A2C9JLW7	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (302 aa)
	A0A2C9JRD5	Cyclin N-terminal domain-containing protein. (179 aa)
	A0A2C9JRT0	Uncharacterized protein; Belongs to the cyclin family. (278 aa)
	A0A2C9JUH2	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (100 aa)
	A0A2C9JWT8	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (450 aa)
	A0A2C9JX84	Uncharacterized protein; Belongs to the cyclin family. (290 aa)
	A0A2C9K2F6	Uncharacterized protein; Belongs to the cyclin family. (516 aa)
	A0A2C9K5D2	Cyclin N-terminal domain-containing protein. (498 aa)
	A0A2C9K5W4	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (94 aa)
	A0A2C9KAK8	CYCLIN domain-containing protein; Belongs to the cyclin family. (275 aa)
	A0A2C9KH77	Cyclin N-terminal domain-containing protein. (111 aa)
	A0A2C9KL82	CYCLIN domain-containing protein; Belongs to the cyclin family. (338 aa)
	A0A2C9KS54	Cyclin N-terminal domain-containing protein. (145 aa)
	A0A2C9KSQ6	CYCLIN domain-containing protein; Belongs to the cyclin family. (326 aa)
	A0A2C9KT96	RING-type domain-containing protein. (304 aa)
	A0A2C9KTX6	F-box domain-containing protein; Belongs to the cyclin family. (1132 aa)
	A0A2C9L357	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (307 aa)
	A0A2C9L8W9	Uncharacterized protein. (302 aa)
	A0A2C9LFY0	WD_REPEATS_REGION domain-containing protein. (436 aa)
	A0A2C9M5X9	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (435 aa)

Your Current Organism:

Biomphalaria glabrata

NCBI taxonomy Id: 6526
Other names: Australorbis glabratus, B. glabrata, Planorbis glabratus, bloodfluke planorb

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2C9JIR8	A0A2C9JLJ6	CYCLIN domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.414
A0A2C9JIR8	A0A2C9JLW7	CYCLIN domain-containing protein; Belongs to the cyclin family.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.422
A0A2C9JIR8	A0A2C9JX84	CYCLIN domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein; Belongs to the cyclin family.	0.489
A0A2C9JIR8	A0A2C9K5D2	CYCLIN domain-containing protein; Belongs to the cyclin family.	Cyclin N-terminal domain-containing protein.	0.424
A0A2C9JJU0	A0A2C9JKF8	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein; Belongs to the cyclin family.	0.965
A0A2C9JJU0	A0A2C9JLW7	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.408
A0A2C9JJU0	A0A2C9JRT0	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein; Belongs to the cyclin family.	0.683
A0A2C9JJU0	A0A2C9JUH2	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	0.842
A0A2C9JJU0	A0A2C9JWT8	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.702
A0A2C9JJU0	A0A2C9K5W4	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	0.842
A0A2C9JJU0	A0A2C9KH77	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Cyclin N-terminal domain-containing protein.	0.661
A0A2C9JJU0	A0A2C9KS54	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Cyclin N-terminal domain-containing protein.	0.661
A0A2C9JJU0	A0A2C9KSQ6	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.655
A0A2C9JJU0	A0A2C9KT96	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	RING-type domain-containing protein.	0.522
A0A2C9JJU0	A0A2C9KTX6	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	F-box domain-containing protein; Belongs to the cyclin family.	0.662
A0A2C9JJU0	A0A2C9L357	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.687
A0A2C9JJU0	A0A2C9M5X9	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.917
A0A2C9JKF8	A0A2C9JJU0	Uncharacterized protein; Belongs to the cyclin family.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.965
A0A2C9JKF8	A0A2C9JLW7	Uncharacterized protein; Belongs to the cyclin family.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.408
A0A2C9JKF8	A0A2C9JRT0	Uncharacterized protein; Belongs to the cyclin family.	Uncharacterized protein; Belongs to the cyclin family.	0.661