23 items (Biomphalaria glabrata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2C9LRX4	Uncharacterized protein. (521 aa)
	A0A2C9JEQ6	Uncharacterized protein. (473 aa)
	A0A2C9JEZ5	Uncharacterized protein. (1624 aa)
	A0A2C9JII6	Uncharacterized protein. (455 aa)
	A0A2C9JJ01	Uncharacterized protein. (2054 aa)
	A0A2C9JSS4	PIPK domain-containing protein. (330 aa)
	A0A2C9JUA6	Uncharacterized protein. (684 aa)
	A0A2C9K1I2	WD_REPEATS_REGION domain-containing protein. (1363 aa)
	A0A2C9K1J5	Uncharacterized protein. (1129 aa)
	A0A2C9K6G7	Uncharacterized protein. (264 aa)
	A0A2C9KB85	Uncharacterized protein. (962 aa)
	A0A2C9KJ74	Uncharacterized protein. (387 aa)
	A0A2C9KMZ7	Uncharacterized protein. (362 aa)
	A0A2C9KNF5	SH2 domain-containing protein. (462 aa)
	A0A2C9L1E9	Uncharacterized protein. (515 aa)
	A0A2C9L8W5	Uncharacterized protein. (201 aa)
	A0A2C9LKU0	Uncharacterized protein. (547 aa)
	A0A2C9LL56	Rb_C domain-containing protein. (192 aa)
	A0A2C9LNZ3	Uncharacterized protein. (485 aa)
	A0A2C9LQ82	PIPK domain-containing protein. (111 aa)
	A0A2C9LT71	Uncharacterized protein. (560 aa)
	A0A2C9M070	Uncharacterized protein. (228 aa)
	A0A2C9M689	Uncharacterized protein. (1189 aa)

Your Current Organism:

Biomphalaria glabrata

NCBI taxonomy Id: 6526
Other names: Australorbis glabratus, B. glabrata, Planorbis glabratus, bloodfluke planorb

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2C9JEQ6	A0A2C9JEZ5	Uncharacterized protein.	Uncharacterized protein.	0.615
A0A2C9JEQ6	A0A2C9JII6	Uncharacterized protein.	Uncharacterized protein.	0.590
A0A2C9JEQ6	A0A2C9K6G7	Uncharacterized protein.	Uncharacterized protein.	0.868
A0A2C9JEZ5	A0A2C9JEQ6	Uncharacterized protein.	Uncharacterized protein.	0.615
A0A2C9JII6	A0A2C9JEQ6	Uncharacterized protein.	Uncharacterized protein.	0.590
A0A2C9JII6	A0A2C9K6G7	Uncharacterized protein.	Uncharacterized protein.	0.525
A0A2C9JJ01	A0A2C9JUA6	Uncharacterized protein.	Uncharacterized protein.	0.969
A0A2C9JJ01	A0A2C9L1E9	Uncharacterized protein.	Uncharacterized protein.	0.599
A0A2C9JJ01	A0A2C9M689	Uncharacterized protein.	Uncharacterized protein.	0.600
A0A2C9JSS4	A0A2C9KB85	PIPK domain-containing protein.	Uncharacterized protein.	0.963
A0A2C9JUA6	A0A2C9JJ01	Uncharacterized protein.	Uncharacterized protein.	0.969
A0A2C9K1I2	A0A2C9L1E9	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.828
A0A2C9K1I2	A0A2C9M070	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.771
A0A2C9K1I2	A0A2C9M689	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.853
A0A2C9K1J5	A0A2C9LKU0	Uncharacterized protein.	Uncharacterized protein.	0.686
A0A2C9K1J5	A0A2C9LL56	Uncharacterized protein.	Rb_C domain-containing protein.	0.686
A0A2C9K6G7	A0A2C9JEQ6	Uncharacterized protein.	Uncharacterized protein.	0.868
A0A2C9K6G7	A0A2C9JII6	Uncharacterized protein.	Uncharacterized protein.	0.525
A0A2C9KB85	A0A2C9JSS4	Uncharacterized protein.	PIPK domain-containing protein.	0.963
A0A2C9KB85	A0A2C9LQ82	Uncharacterized protein.	PIPK domain-containing protein.	0.631