66 items (Biomphalaria glabrata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2C9LR70	Uncharacterized protein. (189 aa)
	A0A2C9LSM0	Pex14_N domain-containing protein. (311 aa)
	A0A2C9LZF8	HELICc2 domain-containing protein. (289 aa)
	A0A2C9M0U1	Uncharacterized protein. (271 aa)
	A0A2C9M3G3	Uncharacterized protein. (125 aa)
	A0A2C9M647	Uncharacterized protein. (229 aa)
	A0A2C9M6F3	Uncharacterized protein. (138 aa)
	A0A2C9LI66	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (265 aa)
	A0A2C9LG85	Uncharacterized protein. (1967 aa)
	A0A2C9LKU0	Uncharacterized protein. (547 aa)
	A0A2C9LIF5	Uncharacterized protein. (195 aa)
	A0A182YU44	Uncharacterized protein. (189 aa)
	A0A2C9JDD5	Uncharacterized protein. (405 aa)
	A0A2C9JEX0	Protein kinase domain-containing protein. (437 aa)
	A0A2C9JG93	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (309 aa)
	A0A2C9JIU0	TFIIB-type domain-containing protein. (316 aa)
	A0A2C9JLB2	C2H2-type domain-containing protein. (132 aa)
	A0A2C9JMI5	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (160 aa)
	A0A2C9JN44	RING-type domain-containing protein. (441 aa)
	A0A2C9JP17	PHD-type domain-containing protein. (3476 aa)
	A0A2C9JP28	Helicase ATP-binding domain-containing protein. (506 aa)
	A0A2C9JPV3	Homeobox domain-containing protein. (364 aa)
	A0A2C9JU84	HTH La-type RNA-binding domain-containing protein. (523 aa)
	A0A2C9JUR2	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (1056 aa)
	A0A2C9JUY4	MIT domain-containing protein. (253 aa)
	A0A2C9JWC4	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (132 aa)
	A0A2C9JYT8	Peptidyl-prolyl cis-trans isomerase. (151 aa)
	A0A2C9K0W9	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (133 aa)
	A0A2C9K0Z5	RING-type domain-containing protein. (309 aa)
	A0A2C9K0Z6	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (132 aa)
	A0A2C9K4D5	TIMELESS domain-containing protein. (1012 aa)
	A0A2C9K4R7	Uncharacterized protein. (328 aa)
	A0A2C9K4U4	Uncharacterized protein. (288 aa)
	A0A2C9K9P5	Uncharacterized protein. (869 aa)
	A0A2C9KEG7	PID domain-containing protein. (262 aa)
	A0A2C9KFW0	Sortilin. (939 aa)
	A0A2C9KHM2	Uncharacterized protein. (1107 aa)
	A0A2C9KIF8	Uncharacterized protein. (213 aa)
	A0A2C9KJU3	Uncharacterized protein. (330 aa)
	A0A2C9KK81	Uncharacterized protein. (1358 aa)
	A0A2C9KL45	Uncharacterized protein. (410 aa)
	A0A2C9KMM5	Uncharacterized protein. (481 aa)
	A0A2C9KQ23	CDT1 domain-containing protein. (176 aa)
	A0A2C9KS67	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (132 aa)
	A0A2C9KS96	Nefa_Nip30_N domain-containing protein. (178 aa)
	A0A2C9KU68	Uncharacterized protein. (418 aa)
	A0A2C9KUX0	G-patch domain-containing protein. (363 aa)
	A0A2C9KVN9	CDT1 domain-containing protein. (271 aa)
	A0A2C9KW94	Uncharacterized protein. (248 aa)
	A0A2C9KZD6	CDT1 domain-containing protein. (363 aa)
	A0A2C9L2H3	Uncharacterized protein. (167 aa)
	A0A2C9L4Z3	Uncharacterized protein. (599 aa)
	A0A2C9L8N7	PL48 domain-containing protein. (1110 aa)
	A0A2C9L8P6	PID domain-containing protein. (84 aa)
	A0A2C9L9G9	Uncharacterized protein. (202 aa)
	A0A2C9L9T1	Uncharacterized protein. (182 aa)
	A0A2C9L9W5	RING-type domain-containing protein. (230 aa)
	A0A2C9LAY5	ANK_REP_REGION domain-containing protein. (369 aa)
	A0A2C9LE59	Uncharacterized protein. (113 aa)
	A0A2C9LE85	Uncharacterized protein. (716 aa)
	A0A2C9LEU3	WAPL domain-containing protein. (145 aa)
	A0A2C9LEV4	Uncharacterized protein. (493 aa)
	A0A2C9LF15	Histone-lysine N-methyltransferase, H3 lysine-79 specific. (519 aa)
	A0A2C9LF78	Uncharacterized protein. (77 aa)
	A0A2C9LL56	Rb_C domain-containing protein. (192 aa)
	A0A2C9LQR0	Uncharacterized protein. (174 aa)

Your Current Organism:

Biomphalaria glabrata

NCBI taxonomy Id: 6526
Other names: Australorbis glabratus, B. glabrata, Planorbis glabratus, bloodfluke planorb

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182YU44	A0A2C9L9G9	Uncharacterized protein.	Uncharacterized protein.	0.627
A0A2C9JIU0	A0A2C9JP28	TFIIB-type domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.965
A0A2C9JIU0	A0A2C9LE59	TFIIB-type domain-containing protein.	Uncharacterized protein.	0.979
A0A2C9JIU0	A0A2C9LZF8	TFIIB-type domain-containing protein.	HELICc2 domain-containing protein.	0.965
A0A2C9JLB2	A0A2C9KUX0	C2H2-type domain-containing protein.	G-patch domain-containing protein.	0.663
A0A2C9JP28	A0A2C9JIU0	Helicase ATP-binding domain-containing protein.	TFIIB-type domain-containing protein.	0.965
A0A2C9JP28	A0A2C9LE59	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.799
A0A2C9JP28	A0A2C9LZF8	Helicase ATP-binding domain-containing protein.	HELICc2 domain-containing protein.	0.945
A0A2C9K4U4	A0A2C9KFW0	Uncharacterized protein.	Sortilin.	0.752
A0A2C9K4U4	A0A2C9L9T1	Uncharacterized protein.	Uncharacterized protein.	0.430
A0A2C9K4U4	A0A2C9LF78	Uncharacterized protein.	Uncharacterized protein.	0.430
A0A2C9K4U4	A0A2C9LIF5	Uncharacterized protein.	Uncharacterized protein.	0.747
A0A2C9K4U4	A0A2C9M3G3	Uncharacterized protein.	Uncharacterized protein.	0.423
A0A2C9KFW0	A0A2C9K4U4	Sortilin.	Uncharacterized protein.	0.752
A0A2C9KFW0	A0A2C9L9T1	Sortilin.	Uncharacterized protein.	0.430
A0A2C9KFW0	A0A2C9LF78	Sortilin.	Uncharacterized protein.	0.430
A0A2C9KFW0	A0A2C9LIF5	Sortilin.	Uncharacterized protein.	0.747
A0A2C9KFW0	A0A2C9M3G3	Sortilin.	Uncharacterized protein.	0.423
A0A2C9KIF8	A0A2C9KJU3	Uncharacterized protein.	Uncharacterized protein.	0.808
A0A2C9KJU3	A0A2C9KIF8	Uncharacterized protein.	Uncharacterized protein.	0.808