71 items (Biomphalaria glabrata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2C9JQ68	F-box domain-containing protein. (601 aa)
	A0A2C9JND9	Uncharacterized protein. (513 aa)
	A0A2C9JLG7	F-box domain-containing protein. (1262 aa)
	A0A2C9MA24	WD_REPEATS_REGION domain-containing protein. (1250 aa)
	A0A2C9M804	F-box domain-containing protein. (505 aa)
	A0A2C9M7L3	F-box domain-containing protein. (1508 aa)
	A0A2C9M598	F-box domain-containing protein. (370 aa)
	A0A2C9M4M1	F-box domain-containing protein. (418 aa)
	A0A2C9M294	F-box domain-containing protein. (404 aa)
	A0A2C9M268	F-box domain-containing protein. (193 aa)
	A0A2C9M225	F-box domain-containing protein. (334 aa)
	A0A2C9M0L4	DH domain-containing protein. (1111 aa)
	A0A2C9M0G9	F-box domain-containing protein. (427 aa)
	A0A2C9M053	F-box domain-containing protein. (529 aa)
	A0A2C9LZX2	F-box domain-containing protein. (464 aa)
	A0A2C9LYV0	F-box domain-containing protein. (456 aa)
	A0A2C9LYI8	F-box domain-containing protein. (417 aa)
	A0A2C9LXJ1	F-box domain-containing protein. (489 aa)
	A0A2C9LXG6	Uncharacterized protein. (491 aa)
	A0A2C9LX87	F-box domain-containing protein. (507 aa)
	A0A2C9LVT3	F-box domain-containing protein. (449 aa)
	A0A2C9LV50	F-box domain-containing protein. (448 aa)
	A0A2C9LUX3	F-box domain-containing protein. (526 aa)
	A0A2C9LUT1	Uncharacterized protein. (248 aa)
	A0A2C9LNA9	F-box domain-containing protein. (484 aa)
	A0A2C9LN61	F-box domain-containing protein. (340 aa)
	A0A2C9LMQ0	WD_REPEATS_REGION domain-containing protein. (440 aa)
	A0A2C9LL43	F-box domain-containing protein. (139 aa)
	A0A2C9LKM7	F-box domain-containing protein. (679 aa)
	A0A2C9LKE0	F-box domain-containing protein. (433 aa)
	A0A2C9LJG1	F-box domain-containing protein. (344 aa)
	A0A2C9LH16	F-box domain-containing protein. (444 aa)
	A0A2C9LGC4	F-box domain-containing protein. (523 aa)
	A0A2C9LFZ3	F-box domain-containing protein. (249 aa)
	A0A2C9LDJ6	F-box domain-containing protein. (312 aa)
	A0A2C9LCJ2	F-box domain-containing protein. (164 aa)
	A0A2C9LBQ6	F-box domain-containing protein. (721 aa)
	A0A2C9LA97	F-box domain-containing protein. (450 aa)
	A0A2C9L8U8	F-box domain-containing protein. (534 aa)
	A0A2C9L8K7	Uncharacterized protein. (1185 aa)
	A0A2C9L8C9	F-box domain-containing protein. (478 aa)
	A0A2C9L4R4	F-box domain-containing protein. (418 aa)
	A0A2C9L2M1	Uncharacterized protein. (439 aa)
	A0A2C9L1F7	F-box domain-containing protein. (426 aa)
	A0A2C9KUG7	F-box domain-containing protein. (474 aa)
	A0A2C9KUG3	F-box domain-containing protein. (154 aa)
	A0A2C9KU49	Uncharacterized protein. (294 aa)
	A0A2C9KTX6	F-box domain-containing protein; Belongs to the cyclin family. (1132 aa)
	A0A2C9KTF7	F-box domain-containing protein. (443 aa)
	A0A2C9KR63	F-box domain-containing protein. (210 aa)
	A0A2C9KNI8	F-box domain-containing protein. (381 aa)
	A0A2C9KMZ6	F-box domain-containing protein. (655 aa)
	A0A2C9KKJ8	F-box domain-containing protein. (414 aa)
	A0A2C9KFM9	Uncharacterized protein. (383 aa)
	A0A2C9KFC0	Uncharacterized protein. (353 aa)
	A0A2C9K7T4	F-box domain-containing protein. (561 aa)
	A0A2C9K3T8	Uncharacterized protein. (872 aa)
	A0A2C9K2C9	F-box domain-containing protein. (323 aa)
	A0A2C9JZU9	F-box domain-containing protein. (1354 aa)
	A0A2C9JZ40	Uncharacterized protein. (401 aa)
	A0A2C9JU29	Uncharacterized protein. (279 aa)
	A0A2C9JT43	Uncharacterized protein. (950 aa)
	A0A2C9JRD8	Uncharacterized protein. (403 aa)
	A0A2C9JQU9	Uncharacterized protein. (299 aa)
	A0A2C9JQF5	Uncharacterized protein. (756 aa)
	A0A2C9JKW5	WD_REPEATS_REGION domain-containing protein. (803 aa)
	A0A2C9JKN9	Uncharacterized protein. (2250 aa)
	A0A2C9JE60	F-box domain-containing protein. (992 aa)
	A0A2C9JPN2	Uncharacterized protein. (308 aa)
	A0A2C9JPH9	F-box domain-containing protein. (1069 aa)
	A0A2C9JNL4	Uncharacterized protein. (256 aa)

Your Current Organism:

Biomphalaria glabrata

NCBI taxonomy Id: 6526
Other names: Australorbis glabratus, B. glabrata, Planorbis glabratus, bloodfluke planorb

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2C9JE60	A0A2C9JND9	F-box domain-containing protein.	Uncharacterized protein.	0.462
A0A2C9JE60	A0A2C9K2C9	F-box domain-containing protein.	F-box domain-containing protein.	0.481
A0A2C9JE60	A0A2C9LA97	F-box domain-containing protein.	F-box domain-containing protein.	0.420
A0A2C9JE60	A0A2C9LN61	F-box domain-containing protein.	F-box domain-containing protein.	0.434
A0A2C9JE60	A0A2C9M053	F-box domain-containing protein.	F-box domain-containing protein.	0.489
A0A2C9JKW5	A0A2C9JND9	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.991
A0A2C9JKW5	A0A2C9KU49	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.921
A0A2C9JKW5	A0A2C9L2M1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.969
A0A2C9JKW5	A0A2C9LN61	WD_REPEATS_REGION domain-containing protein.	F-box domain-containing protein.	0.986
A0A2C9JKW5	A0A2C9LNA9	WD_REPEATS_REGION domain-containing protein.	F-box domain-containing protein.	0.990
A0A2C9JKW5	A0A2C9M053	WD_REPEATS_REGION domain-containing protein.	F-box domain-containing protein.	0.989
A0A2C9JND9	A0A2C9JE60	Uncharacterized protein.	F-box domain-containing protein.	0.462
A0A2C9JND9	A0A2C9JKW5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.991
A0A2C9JND9	A0A2C9JRD8	Uncharacterized protein.	Uncharacterized protein.	0.743
A0A2C9JND9	A0A2C9JZ40	Uncharacterized protein.	Uncharacterized protein.	0.414
A0A2C9JND9	A0A2C9K2C9	Uncharacterized protein.	F-box domain-containing protein.	0.524
A0A2C9JND9	A0A2C9KTX6	Uncharacterized protein.	F-box domain-containing protein; Belongs to the cyclin family.	0.484
A0A2C9JND9	A0A2C9KU49	Uncharacterized protein.	Uncharacterized protein.	0.932
A0A2C9JND9	A0A2C9L2M1	Uncharacterized protein.	Uncharacterized protein.	0.973
A0A2C9JND9	A0A2C9L8K7	Uncharacterized protein.	Uncharacterized protein.	0.787