32 items (Biomphalaria glabrata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2C9KVK7	Uncharacterized protein. (548 aa)
	A0A2C9JFF4	B30.2/SPRY domain-containing protein. (1356 aa)
	A0A2C9JFQ0	Uncharacterized protein. (187 aa)
	A0A2C9JG48	Uncharacterized protein. (587 aa)
	A0A2C9JGN9	Uncharacterized protein. (297 aa)
	A0A2C9JHI0	Uncharacterized protein. (269 aa)
	A0A2C9JHS6	NHR domain-containing protein. (169 aa)
	A0A2C9JJ91	Uncharacterized protein. (665 aa)
	A0A2C9JJG2	B30.2/SPRY domain-containing protein. (193 aa)
	A0A2C9JNL4	Uncharacterized protein. (256 aa)
	A0A2C9JRB0	B30.2/SPRY domain-containing protein. (536 aa)
	A0A2C9K2G4	Uncharacterized protein. (311 aa)
	A0A2C9K4A1	Uncharacterized protein. (325 aa)
	A0A2C9K4D1	B30.2/SPRY domain-containing protein. (400 aa)
	A0A2C9K7T7	Uncharacterized protein. (1333 aa)
	A0A2C9K9F3	Uncharacterized protein. (4926 aa)
	A0A2C9KB19	HECT domain-containing protein. (4306 aa)
	A0A2C9KCS9	Uncharacterized protein. (3986 aa)
	A0A2C9KE11	Uncharacterized protein. (119 aa)
	A0A2C9KJC1	B30.2/SPRY domain-containing protein. (632 aa)
	A0A2C9KJD9	B30.2/SPRY domain-containing protein. (708 aa)
	A0A2C9KMC1	B30.2/SPRY domain-containing protein. (373 aa)
	A0A2C9KQK5	Uncharacterized protein. (731 aa)
	A0A2C9L080	B30.2/SPRY domain-containing protein. (959 aa)
	A0A2C9L0K3	B30.2/SPRY domain-containing protein. (1254 aa)
	A0A2C9LBC6	NHR domain-containing protein. (124 aa)
	A0A2C9LBK0	B30.2/SPRY domain-containing protein. (284 aa)
	A0A2C9LCQ5	NHR domain-containing protein. (478 aa)
	A0A2C9LQZ9	Uncharacterized protein. (381 aa)
	A0A2C9LSJ2	Uncharacterized protein. (277 aa)
	A0A2C9LXS1	SPRY domain-containing protein. (446 aa)
	A0A2C9LYM7	NHR domain-containing protein. (146 aa)

Your Current Organism:

Biomphalaria glabrata

NCBI taxonomy Id: 6526
Other names: Australorbis glabratus, B. glabrata, Planorbis glabratus, bloodfluke planorb

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2C9JG48	A0A2C9JGN9	Uncharacterized protein.	Uncharacterized protein.	0.671
A0A2C9JGN9	A0A2C9JG48	Uncharacterized protein.	Uncharacterized protein.	0.671
A0A2C9JGN9	A0A2C9K2G4	Uncharacterized protein.	Uncharacterized protein.	0.495
A0A2C9JNL4	A0A2C9KJC1	Uncharacterized protein.	B30.2/SPRY domain-containing protein.	0.532
A0A2C9JNL4	A0A2C9L080	Uncharacterized protein.	B30.2/SPRY domain-containing protein.	0.532
A0A2C9JNL4	A0A2C9LQZ9	Uncharacterized protein.	Uncharacterized protein.	0.532
A0A2C9JNL4	A0A2C9LXS1	Uncharacterized protein.	SPRY domain-containing protein.	0.744
A0A2C9K2G4	A0A2C9JGN9	Uncharacterized protein.	Uncharacterized protein.	0.495
A0A2C9K4A1	A0A2C9LYM7	Uncharacterized protein.	NHR domain-containing protein.	0.460
A0A2C9K7T7	A0A2C9KCS9	Uncharacterized protein.	Uncharacterized protein.	0.585
A0A2C9KCS9	A0A2C9K7T7	Uncharacterized protein.	Uncharacterized protein.	0.585
A0A2C9KJC1	A0A2C9JNL4	B30.2/SPRY domain-containing protein.	Uncharacterized protein.	0.532
A0A2C9L080	A0A2C9JNL4	B30.2/SPRY domain-containing protein.	Uncharacterized protein.	0.532
A0A2C9LQZ9	A0A2C9JNL4	Uncharacterized protein.	Uncharacterized protein.	0.532
A0A2C9LXS1	A0A2C9JNL4	SPRY domain-containing protein.	Uncharacterized protein.	0.744
A0A2C9LYM7	A0A2C9K4A1	NHR domain-containing protein.	Uncharacterized protein.	0.460