(66 nodes) Mixed, incl. Cell cycle phase transition, and Spindle checkpoint signaling network (Albugo candida)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BN9_051050	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (228 aa)
	BN9_119480	Uncharacterized protein. (828 aa)
	BN9_126090	Protein kinase domain-containing protein. (655 aa)
	BN9_001420	Uncharacterized protein. (612 aa)
	BN9_001440	Uncharacterized protein. (541 aa)
	BN9_001450	TPR_REGION domain-containing protein. (340 aa)
	BN9_001410	Uncharacterized protein. (649 aa)
	BN9_003260	Uncharacterized protein. (340 aa)
	BN9_001430	Uncharacterized protein. (578 aa)
	BN9_004460	Protein kinase domain-containing protein. (601 aa)
	BN9_005930	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (392 aa)
	BN9_012260	TPR_REGION domain-containing protein. (700 aa)
	BN9_007640	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (297 aa)
	BN9_013060	Protein kinase domain-containing protein; Belongs to the cyclin family. (882 aa)
	BN9_012230	TPR_REGION domain-containing protein. (601 aa)
	BN9_012280	TPR_REGION domain-containing protein. (583 aa)
	BN9_013080	Protein kinase domain-containing protein; Belongs to the cyclin family. (859 aa)
	BN9_012240	TPR_REGION domain-containing protein. (603 aa)
	BN9_012290	TPR_REGION domain-containing protein. (682 aa)
	BN9_009510	Uncharacterized protein. (3708 aa)
	BN9_012250	TPR_REGION domain-containing protein. (585 aa)
	BN9_012300	TPR_REGION domain-containing protein. (680 aa)
	BN9_014700	Uncharacterized protein. (115 aa)
	BN9_012270	TPR_REGION domain-containing protein. (698 aa)
	BN9_015160	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (1362 aa)
	BN9_013070	Protein kinase domain-containing protein; Belongs to the cyclin family. (864 aa)
	BN9_014420	TPR_REGION domain-containing protein. (622 aa)
	BN9_020950	Protein kinase domain-containing protein. (602 aa)
	BN9_020060	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (296 aa)
	BN9_027950	Uncharacterized protein. (3263 aa)
	BN9_030540	Protein kinase domain-containing protein. (768 aa)
	BN9_031640	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (102 aa)
	BN9_039470	WD_REPEATS_REGION domain-containing protein. (176 aa)
	BN9_039480	WD_REPEATS_REGION domain-containing protein. (141 aa)
	BN9_039490	WD_REPEATS_REGION domain-containing protein. (122 aa)
	BN9_037010	DEP domain-containing protein. (453 aa)
	BN9_043670	Uncharacterized protein. (403 aa)
	BN9_039460	WD_REPEATS_REGION domain-containing protein. (185 aa)
	BN9_048150	Uncharacterized protein. (569 aa)
	BN9_046530	WD_REPEATS_REGION domain-containing protein. (468 aa)
	BN9_048590	Uncharacterized protein; Belongs to the cyclin family. (298 aa)
	BN9_052600	Uncharacterized protein. (2092 aa)
	BN9_052610	Uncharacterized protein. (2093 aa)
	BN9_054260	Uncharacterized protein. (1327 aa)
	BN9_054070	Uncharacterized protein; Belongs to the cyclin family. (396 aa)
	BN9_061770	Uncharacterized protein. (629 aa)
	BN9_056910	Uncharacterized protein. (505 aa)
	BN9_065680	Uncharacterized protein. (2407 aa)
	BN9_065550	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. (181 aa)
	BN9_075210	Uncharacterized protein. (245 aa)
	BN9_085510	Uncharacterized protein. (789 aa)
	BN9_085720	Rhodanese domain-containing protein. (145 aa)
	BN9_086740	CULLIN_2 domain-containing protein; Belongs to the cullin family. (656 aa)
	BN9_085500	Uncharacterized protein. (829 aa)
	BN9_096330	HORMA domain-containing protein. (282 aa)
	BN9_101080	CYCLIN domain-containing protein; Belongs to the cyclin family. (322 aa)
	BN9_107690	Uncharacterized protein. (649 aa)
	BN9_107670	Uncharacterized protein. (651 aa)
	BN9_107720	Uncharacterized protein. (653 aa)
	BN9_104580	Uncharacterized protein. (2004 aa)
	BN9_107680	Uncharacterized protein. (651 aa)
	BN9_107700	Uncharacterized protein. (651 aa)
	BN9_122700	ANAPC5 domain-containing protein. (863 aa)
	BN9_126400	Uncharacterized protein. (324 aa)
	BN9_120290	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (301 aa)
	BN9_133230	Uncharacterized protein. (321 aa)

Your Current Organism:

Albugo candida

NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN9_001410	BN9_003260	A0A024FYJ4	A0A024FZ17	Uncharacterized protein.	Uncharacterized protein.	0.948
BN9_001410	BN9_004460	A0A024FYJ4	A0A024FZB3	Uncharacterized protein.	Protein kinase domain-containing protein.	0.612
BN9_001410	BN9_005930	A0A024FYJ4	A0A024G0H7	Uncharacterized protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.844
BN9_001410	BN9_007640	A0A024FYJ4	A0A024G0Z6	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.804
BN9_001410	BN9_012230	A0A024FYJ4	A0A024G118	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.830
BN9_001410	BN9_012240	A0A024FYJ4	A0A024G1C6	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.830
BN9_001410	BN9_012250	A0A024FYJ4	A0A024G1N5	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.830
BN9_001410	BN9_012260	A0A024FYJ4	A0A024G0T3	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.830
BN9_001410	BN9_012270	A0A024FYJ4	A0A024G2B6	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.830
BN9_001410	BN9_012280	A0A024FYJ4	A0A024G121	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.830
BN9_001410	BN9_012290	A0A024FYJ4	A0A024G1D0	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.830
BN9_001410	BN9_012300	A0A024FYJ4	A0A024G1N7	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.830
BN9_001410	BN9_013060	A0A024FYJ4	A0A024G0Z9	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the cyclin family.	0.804
BN9_001410	BN9_013070	A0A024FYJ4	A0A024G2I8	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the cyclin family.	0.804
BN9_001410	BN9_013080	A0A024FYJ4	A0A024G185	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the cyclin family.	0.804
BN9_001410	BN9_014420	A0A024FYJ4	A0A024G2W5	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.957
BN9_001410	BN9_014700	A0A024FYJ4	A0A024G1Z4	Uncharacterized protein.	Uncharacterized protein.	0.888
BN9_001410	BN9_015160	A0A024FYJ4	A0A024G2D9	Uncharacterized protein.	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.	0.772
BN9_001410	BN9_020060	A0A024FYJ4	A0A024G3R9	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.804
BN9_001410	BN9_027950	A0A024FYJ4	A0A024G5H9	Uncharacterized protein.	Uncharacterized protein.	0.950