(5 nodes) Mixed, incl. Mad2-like, and Nuclear transport factor 2 domain network (Albugo candida)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BN9_001450	TPR_REGION domain-containing protein. (340 aa)
	BN9_003260	Uncharacterized protein. (340 aa)
	BN9_037010	DEP domain-containing protein. (453 aa)
	BN9_054260	Uncharacterized protein. (1327 aa)
	BN9_096330	HORMA domain-containing protein. (282 aa)

Your Current Organism:

Albugo candida

NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN9_001450	BN9_003260	A0A024FY68	A0A024FZ17	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.948
BN9_001450	BN9_037010	A0A024FY68	A0A024G9E6	TPR_REGION domain-containing protein.	DEP domain-containing protein.	0.892
BN9_001450	BN9_054260	A0A024FY68	A0A024GD52	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.947
BN9_001450	BN9_096330	A0A024FY68	A0A024GPQ3	TPR_REGION domain-containing protein.	HORMA domain-containing protein.	0.946
BN9_003260	BN9_001450	A0A024FZ17	A0A024FY68	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.948
BN9_003260	BN9_037010	A0A024FZ17	A0A024G9E6	Uncharacterized protein.	DEP domain-containing protein.	0.970
BN9_003260	BN9_054260	A0A024FZ17	A0A024GD52	Uncharacterized protein.	Uncharacterized protein.	0.997
BN9_003260	BN9_096330	A0A024FZ17	A0A024GPQ3	Uncharacterized protein.	HORMA domain-containing protein.	0.997
BN9_037010	BN9_001450	A0A024G9E6	A0A024FY68	DEP domain-containing protein.	TPR_REGION domain-containing protein.	0.892
BN9_037010	BN9_003260	A0A024G9E6	A0A024FZ17	DEP domain-containing protein.	Uncharacterized protein.	0.970
BN9_037010	BN9_054260	A0A024G9E6	A0A024GD52	DEP domain-containing protein.	Uncharacterized protein.	0.985
BN9_037010	BN9_096330	A0A024G9E6	A0A024GPQ3	DEP domain-containing protein.	HORMA domain-containing protein.	0.987
BN9_054260	BN9_001450	A0A024GD52	A0A024FY68	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.947
BN9_054260	BN9_003260	A0A024GD52	A0A024FZ17	Uncharacterized protein.	Uncharacterized protein.	0.997
BN9_054260	BN9_037010	A0A024GD52	A0A024G9E6	Uncharacterized protein.	DEP domain-containing protein.	0.985
BN9_054260	BN9_096330	A0A024GD52	A0A024GPQ3	Uncharacterized protein.	HORMA domain-containing protein.	0.999
BN9_096330	BN9_001450	A0A024GPQ3	A0A024FY68	HORMA domain-containing protein.	TPR_REGION domain-containing protein.	0.946
BN9_096330	BN9_003260	A0A024GPQ3	A0A024FZ17	HORMA domain-containing protein.	Uncharacterized protein.	0.997
BN9_096330	BN9_037010	A0A024GPQ3	A0A024G9E6	HORMA domain-containing protein.	DEP domain-containing protein.	0.987
BN9_096330	BN9_054260	A0A024GPQ3	A0A024GD52	HORMA domain-containing protein.	Uncharacterized protein.	0.999