12 items (Albugo candida) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BN9_003730	Protein kinase domain-containing protein. (451 aa)
	BN9_009530	Uncharacterized protein. (1646 aa)
	BN9_014310	Protein kinase domain-containing protein. (408 aa)
	BN9_014590	Uncharacterized protein. (719 aa)
	BN9_037870	Uncharacterized protein. (339 aa)
	BN9_038940	Photolyase/cryptochrome alpha/beta domain-containing protein. (622 aa)
	BN9_038990	Photolyase/cryptochrome alpha/beta domain-containing protein. (631 aa)
	BN9_070270	Photolyase/cryptochrome alpha/beta domain-containing protein. (542 aa)
	BN9_097250	TIMELESS domain-containing protein. (835 aa)
	BN9_097260	TIMELESS domain-containing protein. (834 aa)
	BN9_097230	TIMELESS domain-containing protein. (838 aa)
	BN9_106960	Protein kinase domain-containing protein. (1150 aa)

Your Current Organism:

Albugo candida

NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN9_003730	BN9_009530	A0A024FZU5	A0A024G0I4	Protein kinase domain-containing protein.	Uncharacterized protein.	0.803
BN9_003730	BN9_014590	A0A024FZU5	A0A024G1Y5	Protein kinase domain-containing protein.	Uncharacterized protein.	0.803
BN9_003730	BN9_038940	A0A024FZU5	A0A024G977	Protein kinase domain-containing protein.	Photolyase/cryptochrome alpha/beta domain-containing protein.	0.803
BN9_003730	BN9_038990	A0A024FZU5	A0A024G981	Protein kinase domain-containing protein.	Photolyase/cryptochrome alpha/beta domain-containing protein.	0.803
BN9_003730	BN9_070270	A0A024FZU5	A0A024GID1	Protein kinase domain-containing protein.	Photolyase/cryptochrome alpha/beta domain-containing protein.	0.803
BN9_003730	BN9_097230	A0A024FZU5	A0A024GQD2	Protein kinase domain-containing protein.	TIMELESS domain-containing protein.	0.592
BN9_003730	BN9_097250	A0A024FZU5	A0A024GPC0	Protein kinase domain-containing protein.	TIMELESS domain-containing protein.	0.592
BN9_003730	BN9_097260	A0A024FZU5	A0A024GPV2	Protein kinase domain-containing protein.	TIMELESS domain-containing protein.	0.592
BN9_009530	BN9_003730	A0A024G0I4	A0A024FZU5	Uncharacterized protein.	Protein kinase domain-containing protein.	0.803
BN9_009530	BN9_014310	A0A024G0I4	A0A024G1B7	Uncharacterized protein.	Protein kinase domain-containing protein.	0.803
BN9_009530	BN9_037870	A0A024G0I4	A0A024G8C8	Uncharacterized protein.	Uncharacterized protein.	0.742
BN9_009530	BN9_097230	A0A024G0I4	A0A024GQD2	Uncharacterized protein.	TIMELESS domain-containing protein.	0.804
BN9_009530	BN9_097250	A0A024G0I4	A0A024GPC0	Uncharacterized protein.	TIMELESS domain-containing protein.	0.804
BN9_009530	BN9_097260	A0A024G0I4	A0A024GPV2	Uncharacterized protein.	TIMELESS domain-containing protein.	0.804
BN9_009530	BN9_106960	A0A024G0I4	A0A024GR60	Uncharacterized protein.	Protein kinase domain-containing protein.	0.803
BN9_014310	BN9_009530	A0A024G1B7	A0A024G0I4	Protein kinase domain-containing protein.	Uncharacterized protein.	0.803
BN9_014310	BN9_014590	A0A024G1B7	A0A024G1Y5	Protein kinase domain-containing protein.	Uncharacterized protein.	0.803
BN9_014310	BN9_038940	A0A024G1B7	A0A024G977	Protein kinase domain-containing protein.	Photolyase/cryptochrome alpha/beta domain-containing protein.	0.803
BN9_014310	BN9_038990	A0A024G1B7	A0A024G981	Protein kinase domain-containing protein.	Photolyase/cryptochrome alpha/beta domain-containing protein.	0.803
BN9_014310	BN9_070270	A0A024G1B7	A0A024GID1	Protein kinase domain-containing protein.	Photolyase/cryptochrome alpha/beta domain-containing protein.	0.803