(11 nodes) Protein insertion into ER membrane by stop-transfer membrane-anchor sequence network (Albugo candida)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BN9_012790	Uncharacterized protein. (175 aa)
	BN9_027430	Uncharacterized protein. (108 aa)
	BN9_027440	Uncharacterized protein. (103 aa)
	BN9_056470	Uncharacterized protein. (255 aa)
	BN9_056460	ER membrane protein complex subunit 3. (281 aa)
	BN9_084280	DUF2012 domain-containing protein. (199 aa)
	BN9_100080	Uncharacterized protein. (259 aa)
	BN9_108550	EMC1_C domain-containing protein. (972 aa)
	BN9_108560	EMC1_C domain-containing protein. (840 aa)
	BN9_119800	MPN domain-containing protein. (205 aa)
	BN9_119810	Uncharacterized protein. (103 aa)

Your Current Organism:

Albugo candida

NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN9_012790	BN9_027430	A0A024G1G6	A0A024G533	Uncharacterized protein.	Uncharacterized protein.	0.951
BN9_012790	BN9_027440	A0A024G1G6	A0A024G6M7	Uncharacterized protein.	Uncharacterized protein.	0.951
BN9_012790	BN9_056460	A0A024G1G6	A0A024GER2	Uncharacterized protein.	ER membrane protein complex subunit 3.	0.970
BN9_012790	BN9_056470	A0A024G1G6	A0A024GDH6	Uncharacterized protein.	Uncharacterized protein.	0.970
BN9_012790	BN9_084280	A0A024G1G6	A0A024GKP2	Uncharacterized protein.	DUF2012 domain-containing protein.	0.977
BN9_012790	BN9_100080	A0A024G1G6	A0A024GPT7	Uncharacterized protein.	Uncharacterized protein.	0.964
BN9_012790	BN9_108550	A0A024G1G6	A0A024GS33	Uncharacterized protein.	EMC1_C domain-containing protein.	0.953
BN9_012790	BN9_108560	A0A024G1G6	A0A024GSJ3	Uncharacterized protein.	EMC1_C domain-containing protein.	0.953
BN9_012790	BN9_119800	A0A024G1G6	A0A024GTN6	Uncharacterized protein.	MPN domain-containing protein.	0.931
BN9_012790	BN9_119810	A0A024G1G6	A0A024GVB5	Uncharacterized protein.	Uncharacterized protein.	0.931
BN9_027430	BN9_012790	A0A024G533	A0A024G1G6	Uncharacterized protein.	Uncharacterized protein.	0.951
BN9_027430	BN9_056460	A0A024G533	A0A024GER2	Uncharacterized protein.	ER membrane protein complex subunit 3.	0.895
BN9_027430	BN9_056470	A0A024G533	A0A024GDH6	Uncharacterized protein.	Uncharacterized protein.	0.895
BN9_027430	BN9_084280	A0A024G533	A0A024GKP2	Uncharacterized protein.	DUF2012 domain-containing protein.	0.943
BN9_027430	BN9_100080	A0A024G533	A0A024GPT7	Uncharacterized protein.	Uncharacterized protein.	0.941
BN9_027430	BN9_108550	A0A024G533	A0A024GS33	Uncharacterized protein.	EMC1_C domain-containing protein.	0.891
BN9_027430	BN9_108560	A0A024G533	A0A024GSJ3	Uncharacterized protein.	EMC1_C domain-containing protein.	0.891
BN9_027430	BN9_119800	A0A024G533	A0A024GTN6	Uncharacterized protein.	MPN domain-containing protein.	0.784
BN9_027430	BN9_119810	A0A024G533	A0A024GVB5	Uncharacterized protein.	Uncharacterized protein.	0.784
BN9_027440	BN9_012790	A0A024G6M7	A0A024G1G6	Uncharacterized protein.	Uncharacterized protein.	0.951