91 items (Albugo candida) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BN9_010690	Uncharacterized protein. (1365 aa)
	BN9_010700	Uncharacterized protein. (1419 aa)
	BN9_008940	Uncharacterized protein. (493 aa)
	BN9_012340	VKc domain-containing protein. (556 aa)
	BN9_015140	C2 domain-containing protein. (1419 aa)
	BN9_010720	Uncharacterized protein. (1254 aa)
	BN9_011020	WW domain-containing protein. (1325 aa)
	BN9_015160	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (1362 aa)
	BN9_017590	Uncharacterized protein. (1215 aa)
	BN9_019190	Uncharacterized protein. (270 aa)
	BN9_014730	Uncharacterized protein. (705 aa)
	BN9_020120	Uncharacterized protein. (2706 aa)
	BN9_021350	Uncharacterized protein. (559 aa)
	BN9_021360	Uncharacterized protein. (576 aa)
	BN9_024730	Uncharacterized protein. (863 aa)
	BN9_024880	Uncharacterized protein. (828 aa)
	BN9_024520	Bac_surface_Ag domain-containing protein. (1558 aa)
	BN9_032880	Uncharacterized protein. (547 aa)
	BN9_032890	Uncharacterized protein. (508 aa)
	BN9_033610	Uncharacterized protein. (286 aa)
	BN9_037870	Uncharacterized protein. (339 aa)
	BN9_039600	Uncharacterized protein. (609 aa)
	BN9_039650	Uncharacterized protein. (536 aa)
	BN9_039570	Uncharacterized protein. (540 aa)
	BN9_039620	Uncharacterized protein. (606 aa)
	BN9_037840	Uncharacterized protein. (437 aa)
	BN9_039580	Uncharacterized protein. (591 aa)
	BN9_039630	Uncharacterized protein. (594 aa)
	BN9_039590	Uncharacterized protein. (467 aa)
	BN9_039640	Uncharacterized protein. (521 aa)
	BN9_041480	Uncharacterized protein. (299 aa)
	BN9_039560	Uncharacterized protein. (518 aa)
	BN9_076480	Uncharacterized protein. (701 aa)
	BN9_077130	Protein kinase domain-containing protein. (768 aa)
	BN9_076010	Uncharacterized protein. (949 aa)
	BN9_079860	Ubiquitin-like domain-containing protein. (597 aa)
	BN9_076490	Uncharacterized protein. (696 aa)
	BN9_082450	ANK_REP_REGION domain-containing protein. (712 aa)
	BN9_083550	Uncharacterized protein. (570 aa)
	BN9_084980	Uncharacterized protein. (151 aa)
	BN9_085200	zf-C3H1 domain-containing protein. (1596 aa)
	BN9_086060	Uncharacterized protein. (415 aa)
	BN9_084740	Uncharacterized protein. (585 aa)
	BN9_085190	zf-C3H1 domain-containing protein. (1600 aa)
	BN9_090460	Uncharacterized protein. (114 aa)
	BN9_086050	Uncharacterized protein. (415 aa)
	BN9_086300	Uncharacterized protein. (434 aa)
	BN9_092510	Uncharacterized protein. (618 aa)
	BN9_090450	Uncharacterized protein. (102 aa)
	BN9_095580	Uncharacterized protein. (546 aa)
	BN9_059740	Uncharacterized protein. (523 aa)
	BN9_010140	Uncharacterized protein. (359 aa)
	BN9_010150	Uncharacterized protein. (304 aa)
	BN9_104140	Uncharacterized protein. (118 aa)
	BN9_111230	Uncharacterized protein. (1081 aa)
	BN9_109480	LRRcap domain-containing protein. (311 aa)
	BN9_111670	Uncharacterized protein. (429 aa)
	BN9_111240	Uncharacterized protein. (1040 aa)
	BN9_039610	Uncharacterized protein. (533 aa)
	BN9_044070	Uncharacterized protein. (1558 aa)
	BN9_042640	Protein kinase domain-containing protein. (704 aa)
	BN9_050810	Uncharacterized protein. (4888 aa)
	BN9_050820	Uncharacterized protein. (4872 aa)
	BN9_054500	Uncharacterized protein. (558 aa)
	BN9_061700	Uncharacterized protein. (1065 aa)
	BN9_060980	Uncharacterized protein. (767 aa)
	BN9_061980	Uncharacterized protein. (510 aa)
	BN9_064570	Uncharacterized protein. (482 aa)
	BN9_065790	LRRNT domain-containing protein. (172 aa)
	BN9_068010	Uncharacterized protein. (501 aa)
	BN9_011510	GATA-type domain-containing protein. (778 aa)
	BN9_010730	Uncharacterized protein. (1175 aa)
	BN9_006130	Clu domain-containing protein. (3022 aa)
	BN9_010710	Uncharacterized protein. (1229 aa)
	BN9_009470	Uncharacterized protein. (338 aa)
	BN9_010160	Uncharacterized protein. (432 aa)
	BN9_009270	Uncharacterized protein. (340 aa)
	BN9_010060	Uncharacterized protein. (1232 aa)
	BN9_008630	Uncharacterized protein. (350 aa)
	BN9_002230	Uncharacterized protein. (706 aa)
	BN9_004200	Uncharacterized protein. (909 aa)
	BN9_002560	Uncharacterized protein. (957 aa)
	BN9_002260	Uncharacterized protein. (588 aa)
	BN9_004190	Uncharacterized protein. (939 aa)
	BN9_002250	Uncharacterized protein. (584 aa)
	BN9_002240	Uncharacterized protein. (702 aa)
	BN9_128820	Uncharacterized protein. (254 aa)
	BN9_130310	Uncharacterized protein. (476 aa)
	BN9_113150	Uncharacterized protein. (852 aa)
	BN9_102010	Uncharacterized protein. (384 aa)
	BN9_102340	SAP domain-containing protein. (280 aa)

Your Current Organism:

Albugo candida

NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN9_002230	BN9_041480	A0A024FZG4	A0A024G9N2	Uncharacterized protein.	Uncharacterized protein.	0.400
BN9_002240	BN9_041480	A0A024FY76	A0A024G9N2	Uncharacterized protein.	Uncharacterized protein.	0.400
BN9_002250	BN9_041480	A0A024FYG6	A0A024G9N2	Uncharacterized protein.	Uncharacterized protein.	0.400
BN9_002260	BN9_041480	A0A024FYT7	A0A024G9N2	Uncharacterized protein.	Uncharacterized protein.	0.400
BN9_004190	BN9_033610	A0A024FYP4	A0A024G8C1	Uncharacterized protein.	Uncharacterized protein.	0.570
BN9_004200	BN9_033610	A0A024FYZ2	A0A024G8C1	Uncharacterized protein.	Uncharacterized protein.	0.570
BN9_006130	BN9_041480	A0A024G0J9	A0A024G9N2	Clu domain-containing protein.	Uncharacterized protein.	0.400
BN9_008940	BN9_041480	A0A024G1B3	A0A024G9N2	Uncharacterized protein.	Uncharacterized protein.	0.400
BN9_009270	BN9_041480	A0A024G046	A0A024G9N2	Uncharacterized protein.	Uncharacterized protein.	0.400
BN9_009270	BN9_111670	A0A024G046	A0A024GT40	Uncharacterized protein.	Uncharacterized protein.	0.531
BN9_010140	BN9_033610	A0A024G0N6	A0A024G8C1	Uncharacterized protein.	Uncharacterized protein.	0.626
BN9_010150	BN9_033610	A0A024G0Y3	A0A024G8C1	Uncharacterized protein.	Uncharacterized protein.	0.570
BN9_010160	BN9_033610	A0A024G053	A0A024G8C1	Uncharacterized protein.	Uncharacterized protein.	0.632
BN9_011020	BN9_033610	A0A024G1Y7	A0A024G8C1	WW domain-containing protein.	Uncharacterized protein.	0.570
BN9_011510	BN9_033610	A0A024G0K9	A0A024G8C1	GATA-type domain-containing protein.	Uncharacterized protein.	0.669
BN9_011510	BN9_041480	A0A024G0K9	A0A024G9N2	GATA-type domain-containing protein.	Uncharacterized protein.	0.480
BN9_012340	BN9_033610	A0A024G1D5	A0A024G8C1	VKc domain-containing protein.	Uncharacterized protein.	0.401
BN9_014730	BN9_033610	A0A024G2Z1	A0A024G8C1	Uncharacterized protein.	Uncharacterized protein.	0.570
BN9_015160	BN9_041480	A0A024G2D9	A0A024G9N2	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.	Uncharacterized protein.	0.542
BN9_017590	BN9_033610	A0A024G2J2	A0A024G8C1	Uncharacterized protein.	Uncharacterized protein.	0.570