(8 nodes) Domain present in ubiquitin-regulatory proteins network (Albugo candida)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BN9_019170	Uncharacterized protein. (263 aa)
	BN9_122650	UBX domain-containing protein. (397 aa)
	BN9_126690	UBX domain-containing protein. (194 aa)
	BN9_004320	Uncharacterized protein. (603 aa)
	BN9_004340	Uncharacterized protein. (582 aa)
	BN9_004350	UBX domain-containing protein. (580 aa)
	BN9_004330	UBX domain-containing protein. (601 aa)
	BN9_038440	UBX domain-containing protein. (410 aa)

Your Current Organism:

Albugo candida

NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN9_004320	BN9_019170	A0A024FYI3	A0A024G2P4	Uncharacterized protein.	Uncharacterized protein.	0.910
BN9_004320	BN9_038440	A0A024FYI3	A0A024G938	Uncharacterized protein.	UBX domain-containing protein.	0.821
BN9_004320	BN9_122650	A0A024FYI3	A0A024FVX9	Uncharacterized protein.	UBX domain-containing protein.	0.856
BN9_004320	BN9_126690	A0A024FYI3	A0A024FWF4	Uncharacterized protein.	UBX domain-containing protein.	0.856
BN9_004330	BN9_019170	A0A024G004	A0A024G2P4	UBX domain-containing protein.	Uncharacterized protein.	0.910
BN9_004330	BN9_038440	A0A024G004	A0A024G938	UBX domain-containing protein.	UBX domain-containing protein.	0.821
BN9_004330	BN9_122650	A0A024G004	A0A024FVX9	UBX domain-containing protein.	UBX domain-containing protein.	0.856
BN9_004330	BN9_126690	A0A024G004	A0A024FWF4	UBX domain-containing protein.	UBX domain-containing protein.	0.856
BN9_004340	BN9_019170	A0A024FYR1	A0A024G2P4	Uncharacterized protein.	Uncharacterized protein.	0.910
BN9_004340	BN9_038440	A0A024FYR1	A0A024G938	Uncharacterized protein.	UBX domain-containing protein.	0.821
BN9_004340	BN9_122650	A0A024FYR1	A0A024FVX9	Uncharacterized protein.	UBX domain-containing protein.	0.856
BN9_004340	BN9_126690	A0A024FYR1	A0A024FWF4	Uncharacterized protein.	UBX domain-containing protein.	0.856
BN9_004350	BN9_019170	A0A024FZ06	A0A024G2P4	UBX domain-containing protein.	Uncharacterized protein.	0.910
BN9_004350	BN9_038440	A0A024FZ06	A0A024G938	UBX domain-containing protein.	UBX domain-containing protein.	0.821
BN9_004350	BN9_122650	A0A024FZ06	A0A024FVX9	UBX domain-containing protein.	UBX domain-containing protein.	0.856
BN9_004350	BN9_126690	A0A024FZ06	A0A024FWF4	UBX domain-containing protein.	UBX domain-containing protein.	0.856
BN9_019170	BN9_004320	A0A024G2P4	A0A024FYI3	Uncharacterized protein.	Uncharacterized protein.	0.910
BN9_019170	BN9_004330	A0A024G2P4	A0A024G004	Uncharacterized protein.	UBX domain-containing protein.	0.910
BN9_019170	BN9_004340	A0A024G2P4	A0A024FYR1	Uncharacterized protein.	Uncharacterized protein.	0.910
BN9_019170	BN9_004350	A0A024G2P4	A0A024FZ06	Uncharacterized protein.	UBX domain-containing protein.	0.910