77 items (Albugo candida) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BN9_115280	DM10 domain-containing protein. (867 aa)
	BN9_059710	Nascent polypeptide-associated complex subunit beta. (1170 aa)
	BN9_059680	OMPdecase domain-containing protein. (702 aa)
	BN9_095410	Nucleoside diphosphate kinase. (143 aa)
	BN9_113180	FHA domain-containing protein. (321 aa)
	BN9_120510	Uncharacterized protein. (288 aa)
	BN9_000360	TLC domain-containing protein. (283 aa)
	BN9_001040	OBG-type G domain-containing protein. (349 aa)
	BN9_134570	Nudix hydrolase domain-containing protein. (171 aa)
	BN9_002270	B30.2/SPRY domain-containing protein. (304 aa)
	BN9_000350	TLC domain-containing protein. (276 aa)
	BN9_008010	Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (900 aa)
	BN9_012080	dUTPase domain-containing protein. (240 aa)
	BN9_019300	Uncharacterized protein. (290 aa)
	BN9_021170	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily. (196 aa)
	BN9_021450	Uncharacterized protein; Belongs to the GroES chaperonin family. (100 aa)
	BN9_022600	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. (574 aa)
	BN9_024500	Uncharacterized protein. (798 aa)
	BN9_021180	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily. (193 aa)
	BN9_024320	OBG-type G domain-containing protein. (425 aa)
	BN9_022280	C2 domain-containing protein. (2072 aa)
	BN9_027420	Uncharacterized protein. (392 aa)
	BN9_027690	DM10 domain-containing protein. (361 aa)
	BN9_036150	Uncharacterized protein. (890 aa)
	BN9_037950	Uncharacterized protein. (245 aa)
	BN9_037940	Uncharacterized protein. (331 aa)
	BN9_040430	Uridine kinase; Belongs to the uridine kinase family. (302 aa)
	BN9_036960	Uncharacterized protein. (512 aa)
	BN9_040110	Uncharacterized protein. (2775 aa)
	BN9_046640	Uncharacterized protein. (1507 aa)
	BN9_051590	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family. (494 aa)
	BN9_052380	Uncharacterized protein. (649 aa)
	BN9_057210	Nucleoside diphosphate kinase. (229 aa)
	BN9_067030	Amidohydro-rel domain-containing protein. (367 aa)
	BN9_067840	Uncharacterized protein; Belongs to the 5'-nucleotidase family. (481 aa)
	BN9_068250	Uncharacterized protein. (825 aa)
	BN9_069520	Importin N-terminal domain-containing protein. (1131 aa)
	BN9_067830	Uncharacterized protein; Belongs to the 5'-nucleotidase family. (502 aa)
	BN9_070300	Thymidylate_kin domain-containing protein. (228 aa)
	BN9_075380	PNP_UDP_1 domain-containing protein. (354 aa)
	BN9_079370	FHA domain-containing protein. (842 aa)
	BN9_086330	HD_domain domain-containing protein. (151 aa)
	BN9_127740	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (281 aa)
	BN9_091150	GRIP domain-containing protein. (483 aa)
	BN9_091200	GRIP domain-containing protein. (480 aa)
	BN9_091250	GRIP domain-containing protein. (458 aa)
	BN9_089910	Uncharacterized protein. (933 aa)
	BN9_091300	Uncharacterized protein. (439 aa)
	BN9_091120	Uncharacterized protein. (462 aa)
	BN9_091170	GRIP domain-containing protein. (482 aa)
	BN9_091220	Uncharacterized protein. (460 aa)
	BN9_091270	GRIP domain-containing protein. (461 aa)
	BN9_091320	Uncharacterized protein. (438 aa)
	BN9_091130	GRIP domain-containing protein. (459 aa)
	BN9_091180	Uncharacterized protein. (462 aa)
	BN9_091230	GRIP domain-containing protein. (462 aa)
	BN9_111670	Uncharacterized protein. (429 aa)
	BN9_091280	GRIP domain-containing protein. (479 aa)
	BN9_091330	Uncharacterized protein. (464 aa)
	BN9_091140	GRIP domain-containing protein. (460 aa)
	BN9_091190	GRIP domain-containing protein. (459 aa)
	BN9_091240	GRIP domain-containing protein. (480 aa)
	BN9_091290	GRIP domain-containing protein. (483 aa)
	BN9_089900	Uncharacterized protein. (926 aa)
	BN9_095560	Uncharacterized protein. (474 aa)
	BN9_091110	GRIP domain-containing protein. (464 aa)
	BN9_091160	GRIP domain-containing protein. (484 aa)
	BN9_091210	GRIP domain-containing protein. (463 aa)
	BN9_095570	Uncharacterized protein. (493 aa)
	BN9_091260	Uncharacterized protein. (459 aa)
	BN9_091310	Uncharacterized protein. (441 aa)
	BN9_095650	Uncharacterized protein. (140 aa)
	BN9_096760	Uncharacterized protein. (568 aa)
	BN9_102800	Uncharacterized protein. (485 aa)
	BN9_102810	Uncharacterized protein. (471 aa)
	BN9_103410	Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (784 aa)
	BN9_106630	CMP/dCMP-type deaminase domain-containing protein. (191 aa)

Your Current Organism:

Albugo candida

NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN9_000350	BN9_021170	A0A024FY61	A0A024G3B7	TLC domain-containing protein.	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	0.550
BN9_000350	BN9_021180	A0A024FY61	A0A024G4V8	TLC domain-containing protein.	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	0.550
BN9_000360	BN9_021170	A0A024FXF7	A0A024G3B7	TLC domain-containing protein.	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	0.550
BN9_000360	BN9_021180	A0A024FXF7	A0A024G4V8	TLC domain-containing protein.	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	0.550
BN9_001040	BN9_021170	A0A024FXT5	A0A024G3B7	OBG-type G domain-containing protein.	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	0.528
BN9_001040	BN9_021180	A0A024FXT5	A0A024G4V8	OBG-type G domain-containing protein.	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	0.528
BN9_001040	BN9_022600	A0A024FXT5	A0A024G496	OBG-type G domain-containing protein.	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	0.836
BN9_001040	BN9_027420	A0A024FXT5	A0A024G602	OBG-type G domain-containing protein.	Uncharacterized protein.	0.424
BN9_001040	BN9_027690	A0A024FXT5	A0A024G6P9	OBG-type G domain-containing protein.	DM10 domain-containing protein.	0.424
BN9_001040	BN9_051590	A0A024FXT5	A0A024GCE4	OBG-type G domain-containing protein.	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	0.509
BN9_001040	BN9_057210	A0A024FXT5	A0A024GF13	OBG-type G domain-containing protein.	Nucleoside diphosphate kinase.	0.424
BN9_001040	BN9_070300	A0A024FXT5	A0A024GHV1	OBG-type G domain-containing protein.	Thymidylate_kin domain-containing protein.	0.711
BN9_001040	BN9_095410	A0A024FXT5	A0A024FTD7	OBG-type G domain-containing protein.	Nucleoside diphosphate kinase.	0.424
BN9_001040	BN9_103410	A0A024FXT5	A0A024GQT9	OBG-type G domain-containing protein.	Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.	0.709
BN9_001040	BN9_115280	A0A024FXT5	A0A024GSX1	OBG-type G domain-containing protein.	DM10 domain-containing protein.	0.424
BN9_001040	BN9_134570	A0A024FXT5	A0A024FXW6	OBG-type G domain-containing protein.	Nudix hydrolase domain-containing protein.	0.661
BN9_002270	BN9_111670	A0A024FXZ7	A0A024GT40	B30.2/SPRY domain-containing protein.	Uncharacterized protein.	0.488
BN9_008010	BN9_022600	A0A024G040	A0A024G496	Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	0.710
BN9_008010	BN9_040430	A0A024G040	A0A024G9A4	Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	Uridine kinase; Belongs to the uridine kinase family.	0.727
BN9_008010	BN9_046640	A0A024G040	A0A024GBK7	Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	Uncharacterized protein.	0.959