52 items (Albugo candida) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BN9_122960	WD_REPEATS_REGION domain-containing protein. (380 aa)
	BN9_122950	WD_REPEATS_REGION domain-containing protein. (378 aa)
	BN9_037940	Uncharacterized protein. (331 aa)
	BN9_091110	GRIP domain-containing protein. (464 aa)
	BN9_089900	Uncharacterized protein. (926 aa)
	BN9_091290	GRIP domain-containing protein. (483 aa)
	BN9_091240	GRIP domain-containing protein. (480 aa)
	BN9_091190	GRIP domain-containing protein. (459 aa)
	BN9_091140	GRIP domain-containing protein. (460 aa)
	BN9_091330	Uncharacterized protein. (464 aa)
	BN9_091280	GRIP domain-containing protein. (479 aa)
	BN9_091230	GRIP domain-containing protein. (462 aa)
	BN9_091180	Uncharacterized protein. (462 aa)
	BN9_091130	GRIP domain-containing protein. (459 aa)
	BN9_090720	Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. (534 aa)
	BN9_091320	Uncharacterized protein. (438 aa)
	BN9_091270	GRIP domain-containing protein. (461 aa)
	BN9_091220	Uncharacterized protein. (460 aa)
	BN9_091170	GRIP domain-containing protein. (482 aa)
	BN9_091120	Uncharacterized protein. (462 aa)
	BN9_090370	Uncharacterized protein. (278 aa)
	BN9_091300	Uncharacterized protein. (439 aa)
	BN9_033460	Deacetylase sirtuin-type domain-containing protein. (148 aa)
	BN9_037950	Uncharacterized protein. (245 aa)
	BN9_036150	Uncharacterized protein. (890 aa)
	BN9_033480	Deacetylase sirtuin-type domain-containing protein. (222 aa)
	BN9_033470	Deacetylase sirtuin-type domain-containing protein. (313 aa)
	BN9_008500	Deacetylase sirtuin-type domain-containing protein. (545 aa)
	BN9_134150	WD_REPEATS_REGION domain-containing protein. (300 aa)
	BN9_089910	Uncharacterized protein. (933 aa)
	BN9_091250	GRIP domain-containing protein. (458 aa)
	BN9_091200	GRIP domain-containing protein. (480 aa)
	BN9_091150	GRIP domain-containing protein. (483 aa)
	BN9_090390	Uncharacterized protein. (227 aa)
	BN9_079350	Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family. (718 aa)
	BN9_075380	PNP_UDP_1 domain-containing protein. (354 aa)
	BN9_067830	Uncharacterized protein; Belongs to the 5'-nucleotidase family. (502 aa)
	BN9_067840	Uncharacterized protein; Belongs to the 5'-nucleotidase family. (481 aa)
	BN9_113950	Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. (297 aa)
	BN9_110430	Isochorismatase domain-containing protein. (304 aa)
	BN9_104960	Uncharacterized protein. (550 aa)
	BN9_099120	Uncharacterized protein. (345 aa)
	BN9_104670	Deacetylase sirtuin-type domain-containing protein. (371 aa)
	BN9_096760	Uncharacterized protein. (568 aa)
	BN9_091310	Uncharacterized protein. (441 aa)
	BN9_091260	Uncharacterized protein. (459 aa)
	BN9_091210	GRIP domain-containing protein. (463 aa)
	BN9_091160	GRIP domain-containing protein. (484 aa)
	BN9_056870	Uncharacterized protein. (871 aa)
	BN9_049030	Cnd1 domain-containing protein. (1493 aa)
	BN9_036960	Uncharacterized protein. (512 aa)
	BN9_041320	Uncharacterized protein. (525 aa)

Your Current Organism:

Albugo candida

NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN9_008500	BN9_033460	A0A024FZX8	A0A024G8A9	Deacetylase sirtuin-type domain-containing protein.	Deacetylase sirtuin-type domain-containing protein.	0.797
BN9_008500	BN9_033470	A0A024FZX8	A0A024G735	Deacetylase sirtuin-type domain-containing protein.	Deacetylase sirtuin-type domain-containing protein.	0.777
BN9_008500	BN9_033480	A0A024FZX8	A0A024G7C0	Deacetylase sirtuin-type domain-containing protein.	Deacetylase sirtuin-type domain-containing protein.	0.862
BN9_008500	BN9_075380	A0A024FZX8	A0A024GIK9	Deacetylase sirtuin-type domain-containing protein.	PNP_UDP_1 domain-containing protein.	0.616
BN9_008500	BN9_079350	A0A024FZX8	A0A024GJD1	Deacetylase sirtuin-type domain-containing protein.	Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.	0.913
BN9_008500	BN9_090720	A0A024FZX8	A0A024GMU1	Deacetylase sirtuin-type domain-containing protein.	Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.	0.771
BN9_008500	BN9_091110	A0A024FZX8	A0A024GNY4	Deacetylase sirtuin-type domain-containing protein.	GRIP domain-containing protein.	0.616
BN9_008500	BN9_091120	A0A024FZX8	A0A024GMR4	Deacetylase sirtuin-type domain-containing protein.	Uncharacterized protein.	0.616
BN9_008500	BN9_091130	A0A024FZX8	A0A024GMX3	Deacetylase sirtuin-type domain-containing protein.	GRIP domain-containing protein.	0.616
BN9_008500	BN9_091140	A0A024FZX8	A0A024GNG2	Deacetylase sirtuin-type domain-containing protein.	GRIP domain-containing protein.	0.616
BN9_008500	BN9_091150	A0A024FZX8	A0A024GMF2	Deacetylase sirtuin-type domain-containing protein.	GRIP domain-containing protein.	0.616
BN9_008500	BN9_091160	A0A024FZX8	A0A024GNY9	Deacetylase sirtuin-type domain-containing protein.	GRIP domain-containing protein.	0.616
BN9_008500	BN9_091170	A0A024FZX8	A0A024GMR9	Deacetylase sirtuin-type domain-containing protein.	GRIP domain-containing protein.	0.616
BN9_008500	BN9_091180	A0A024FZX8	A0A024GMX8	Deacetylase sirtuin-type domain-containing protein.	Uncharacterized protein.	0.616
BN9_008500	BN9_091190	A0A024FZX8	A0A024GNG7	Deacetylase sirtuin-type domain-containing protein.	GRIP domain-containing protein.	0.616
BN9_008500	BN9_091200	A0A024FZX8	A0A024GMF9	Deacetylase sirtuin-type domain-containing protein.	GRIP domain-containing protein.	0.616
BN9_008500	BN9_091210	A0A024FZX8	A0A024GNZ3	Deacetylase sirtuin-type domain-containing protein.	GRIP domain-containing protein.	0.616
BN9_008500	BN9_091220	A0A024FZX8	A0A024GMS4	Deacetylase sirtuin-type domain-containing protein.	Uncharacterized protein.	0.616
BN9_008500	BN9_091230	A0A024FZX8	A0A024GMY1	Deacetylase sirtuin-type domain-containing protein.	GRIP domain-containing protein.	0.616
BN9_008500	BN9_091240	A0A024FZX8	A0A024GNH0	Deacetylase sirtuin-type domain-containing protein.	GRIP domain-containing protein.	0.616