(12 nodes) Binding-protein-dependent transport system inner membrane component network (Desulfurispirillum indicum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ADU65705.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: avn:Avin_29660 oligopeptide ABC transporter, inner membrane permease component. (358 aa)
	ADU65219.1	KEGG: gsu:GSU2650 amino acid ABC transporter, permease protein, putative; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component. (260 aa)
	ADU65691.1	Sulfate ABC transporter, inner membrane subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. (276 aa)
	ADU65692.1	KEGG: son:SO_4654 sulfate ABC transporter, permease protein; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component. (289 aa)
	ADU65863.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aeh:Mlg_2270 binding-protein-dependent transport systems inner membrane component. (343 aa)
	ADU66579.1	Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (226 aa)
	ADU66809.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dak:DaAHT2_2225 binding-protein-dependent transport systems inner membrane component. (551 aa)
	ADU66882.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4352 2-aminoethylphosphonate ABC transport system, permease protein. (555 aa)
	ADU66885.1	KEGG: xau:Xaut_3965 phosphonate ABC transporter, inner membrane subunit; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component. (270 aa)
	ADU66886.1	KEGG: xau:Xaut_3964 phosphonate ABC transporter, inner membrane subunit; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component. (303 aa)
	ADU67299.1	KEGG: tgr:Tgr7_2651 phosphate ABC transporter, permease protein; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component. (555 aa)
	ADU67300.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tkm:TK90_0956 binding-protein-dependent transport systems inner membrane component. (758 aa)

Your Current Organism:

Desulfurispirillum indicum

NCBI taxonomy Id: 653733
Other names: D. indicum S5, Desulfurispirillum indicum S5, Desulfurispirillum indicum str. S5, Desulfurispirillum indicum strain S5, bacterium S5, dissimilatory selenate-respiring bacterium S5

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADU65691.1	ADU65692.1	Selin_0953	Selin_0954	Sulfate ABC transporter, inner membrane subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.	KEGG: son:SO_4654 sulfate ABC transporter, permease protein; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.	0.996
ADU65692.1	ADU65691.1	Selin_0954	Selin_0953	KEGG: son:SO_4654 sulfate ABC transporter, permease protein; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.	Sulfate ABC transporter, inner membrane subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.	0.996
ADU65705.1	ADU65863.1	Selin_0967	Selin_1128	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: avn:Avin_29660 oligopeptide ABC transporter, inner membrane permease component.	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aeh:Mlg_2270 binding-protein-dependent transport systems inner membrane component.	0.975
ADU65863.1	ADU65705.1	Selin_1128	Selin_0967	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aeh:Mlg_2270 binding-protein-dependent transport systems inner membrane component.	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: avn:Avin_29660 oligopeptide ABC transporter, inner membrane permease component.	0.975
ADU66809.1	ADU66882.1	Selin_2089	Selin_2162	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dak:DaAHT2_2225 binding-protein-dependent transport systems inner membrane component.	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4352 2-aminoethylphosphonate ABC transport system, permease protein.	0.916
ADU66882.1	ADU66809.1	Selin_2162	Selin_2089	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4352 2-aminoethylphosphonate ABC transport system, permease protein.	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dak:DaAHT2_2225 binding-protein-dependent transport systems inner membrane component.	0.916
ADU66882.1	ADU66885.1	Selin_2162	Selin_2165	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4352 2-aminoethylphosphonate ABC transport system, permease protein.	KEGG: xau:Xaut_3965 phosphonate ABC transporter, inner membrane subunit; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.	0.628
ADU66882.1	ADU66886.1	Selin_2162	Selin_2166	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4352 2-aminoethylphosphonate ABC transport system, permease protein.	KEGG: xau:Xaut_3964 phosphonate ABC transporter, inner membrane subunit; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.	0.628
ADU66885.1	ADU66882.1	Selin_2165	Selin_2162	KEGG: xau:Xaut_3965 phosphonate ABC transporter, inner membrane subunit; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4352 2-aminoethylphosphonate ABC transport system, permease protein.	0.628
ADU66885.1	ADU66886.1	Selin_2165	Selin_2166	KEGG: xau:Xaut_3965 phosphonate ABC transporter, inner membrane subunit; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.	KEGG: xau:Xaut_3964 phosphonate ABC transporter, inner membrane subunit; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.	0.980
ADU66885.1	ADU67299.1	Selin_2165	Selin_2588	KEGG: xau:Xaut_3965 phosphonate ABC transporter, inner membrane subunit; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.	KEGG: tgr:Tgr7_2651 phosphate ABC transporter, permease protein; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component.	0.505
ADU66886.1	ADU66882.1	Selin_2166	Selin_2162	KEGG: xau:Xaut_3964 phosphonate ABC transporter, inner membrane subunit; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4352 2-aminoethylphosphonate ABC transport system, permease protein.	0.628
ADU66886.1	ADU66885.1	Selin_2166	Selin_2165	KEGG: xau:Xaut_3964 phosphonate ABC transporter, inner membrane subunit; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.	KEGG: xau:Xaut_3965 phosphonate ABC transporter, inner membrane subunit; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.	0.980
ADU66886.1	ADU67299.1	Selin_2166	Selin_2588	KEGG: xau:Xaut_3964 phosphonate ABC transporter, inner membrane subunit; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.	KEGG: tgr:Tgr7_2651 phosphate ABC transporter, permease protein; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component.	0.505
ADU67299.1	ADU66885.1	Selin_2588	Selin_2165	KEGG: tgr:Tgr7_2651 phosphate ABC transporter, permease protein; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component.	KEGG: xau:Xaut_3965 phosphonate ABC transporter, inner membrane subunit; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.	0.505
ADU67299.1	ADU66886.1	Selin_2588	Selin_2166	KEGG: tgr:Tgr7_2651 phosphate ABC transporter, permease protein; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component.	KEGG: xau:Xaut_3964 phosphonate ABC transporter, inner membrane subunit; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.	0.505
ADU67299.1	ADU67300.1	Selin_2588	Selin_2589	KEGG: tgr:Tgr7_2651 phosphate ABC transporter, permease protein; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component.	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tkm:TK90_0956 binding-protein-dependent transport systems inner membrane component.	0.999
ADU67300.1	ADU67299.1	Selin_2589	Selin_2588	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tkm:TK90_0956 binding-protein-dependent transport systems inner membrane component.	KEGG: tgr:Tgr7_2651 phosphate ABC transporter, permease protein; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component.	0.999

Server load: low (20%) [HD]

Permalink

Network

Neighborhood

Databases

Fusion

Textmining

Cooccurrence

Experiments

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About