STRINGSTRING
ACK68533.1 ACK68533.1 ACK68926.1 ACK68926.1 ACK68934.1 ACK68934.1 ACK69272.1 ACK69272.1 ACK69580.1 ACK69580.1 psb27 psb27 ACK70104.1 ACK70104.1 ACK70425.1 ACK70425.1 ACK70579.1 ACK70579.1 ACK70718.1 ACK70718.1 psb28 psb28 ACK72318.1 ACK72318.1 ACK72865.1 ACK72865.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACK68533.1PFAM: protein of unknown function DUF1092; KEGG: mar:MAE_09030 hypothetical protein. (290 aa)
ACK68926.1PFAM: NnrUfamily protein; KEGG: mar:MAE_42990 hypothetical protein. (238 aa)
ACK68934.1PFAM: Vitamin K epoxide reductase; KEGG: mar:MAE_28930 thioredoxin-like. (325 aa)
ACK69272.1Putative photosystem II protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity. (334 aa)
ACK69580.1PFAM: photosystem II oxygen evolving complex protein PsbP; KEGG: syn:sll1418 photosystem II oxygen-evolving complex 23K protein PsbP homolog. (183 aa)
psb27Photosystem II protein Psb27; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster. (133 aa)
ACK70104.1KEGG: mar:MAE_06290 hypothetical protein. (155 aa)
ACK70425.1KEGG: syp:SYNPCC7002_A0160 hypothetical protein. (160 aa)
ACK70579.1KEGG: mar:MAE_41890 hypothetical protein. (157 aa)
ACK70718.1KEGG: mar:MAE_50780 hypothetical protein. (253 aa)
psb28TIGRFAM: photosystem II reaction center protein Psb28; PFAM: photosystem II protein PsbW class I; KEGG: mar:MAE_54390 photosystem II reaction center 13 kDa protein; Belongs to the Psb28 family. (111 aa)
ACK72318.1KEGG: ava:Ava_0555 hypothetical protein. (173 aa)
ACK72865.1PFAM: protein of unknown function DUF1350; KEGG: mar:MAE_42380 hypothetical protein. (259 aa)
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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