STRINGSTRING
thf1 thf1 ACK69272.1 ACK69272.1 ACK69045.1 ACK69045.1 ACK68934.1 ACK68934.1 ACK68533.1 ACK68533.1 ACK72861.1 ACK72861.1 ACK72779.1 ACK72779.1 rplT rplT ACK72600.1 ACK72600.1 petG petG ACK71998.1 ACK71998.1 ACK71941.1 ACK71941.1 psbV psbV ACK71448.1 ACK71448.1 ccsA ccsA ACK71161.1 ACK71161.1 ACK70802.1 ACK70802.1 ACK70544.1 ACK70544.1 ACK70543.1 ACK70543.1 ACK70106.1 ACK70106.1 ACK69831.1 ACK69831.1 ACK69810.1 ACK69810.1 psb27 psb27 petN petN ACK73106.1 ACK73106.1 ACK73285.1 ACK73285.1 ACK73349.1 ACK73349.1 ccsB ccsB ftsZ ftsZ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
thf1Photosystem II biogenesis protein Psp29; May be involved in photosynthetic membrane biogenesis. (226 aa)
ACK69272.1Putative photosystem II protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity. (334 aa)
ACK69045.1PFAM: heat shock protein DnaJ domain protein; KEGG: mar:MAE_44490 heat shock protein DnaJ-like. (763 aa)
ACK68934.1PFAM: Vitamin K epoxide reductase; KEGG: mar:MAE_28930 thioredoxin-like. (325 aa)
ACK68533.1PFAM: protein of unknown function DUF1092; KEGG: mar:MAE_09030 hypothetical protein. (290 aa)
ACK72861.1KEGG: syn:ssl3451 hypothetical protein. (89 aa)
ACK72779.1Conserved hypothetical protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. (172 aa)
rplTRibosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (117 aa)
ACK72600.1KEGG: syp:SYNPCC7002_A1956 hypothetical protein. (160 aa)
petGCytochrome b6/f complex subunit 5; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetG is required for either the stability or assembly of the cytochrome b6-f complex. (38 aa)
ACK71998.1TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: syn:slr0945 hypothetical protein. (211 aa)
ACK71941.1TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: mar:MAE_23590 GTP-binding protein TypA/BipA homolog. (597 aa)
psbVCytochrome c-550; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II. (161 aa)
ACK71448.1KEGG: mar:MAE_52340 hypothetical protein. (146 aa)
ccsACytochrome c-type biogenesis protein CcsB; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment. (328 aa)
ACK71161.1KEGG: mar:MAE_08590 hypothetical protein. (359 aa)
ACK70802.1PFAM: Domain of unknown function DUF1817; KEGG: ana:all5169 hypothetical protein. (157 aa)
ACK70544.1KEGG: ana:all1438 nitrogenase FeMo cofactor biosynthesis scaffold protein NifE; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1; Belongs to the NifD/NifK/NifE/NifN family. (467 aa)
ACK70543.1KEGG: ter:Tery_4139 nitrogenase MoFe cofactor biosynthesis protein NifE; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: oxidoreductase/nitrogenase component 1; Belongs to the NifD/NifK/NifE/NifN family. (450 aa)
ACK70106.1PFAM: NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30; KEGG: npu:Npun_F6553 NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30. (494 aa)
ACK69831.1PFAM: protein of unknown function DUF1092; KEGG: ava:Ava_0136 hypothetical protein. (271 aa)
ACK69810.1PFAM: chaperonin family protein RbcX; KEGG: mar:MAE_47880 possible RubisCO chaperonin. (135 aa)
psb27Photosystem II protein Psb27; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster. (133 aa)
petNPetN family protein; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (29 aa)
ACK73106.1KEGG: ter:Tery_4494 hypothetical protein. (104 aa)
ACK73285.1PFAM: photosystem II manganese-stabilizing protein PsbO; KEGG: mar:MAE_44250 photosystem II manganese-stabilizing polypeptide. (275 aa)
ACK73349.1PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: npu:Npun_R5678 cytochrome c biogenesis protein, transmembrane region. (253 aa)
ccsBResB family protein; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment. (459 aa)
ftsZCell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. (418 aa)
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.