STRINGSTRING
psb28 psb28 psbK psbK ACK68667.1 ACK68667.1 psbJ psbJ psbL psbL psbF psbF ACK70901.1 ACK70901.1 psbZ psbZ ACK71774.1 ACK71774.1 psbT psbT ACK73132.1 ACK73132.1 psbI psbI thf1 thf1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
psb28TIGRFAM: photosystem II reaction center protein Psb28; PFAM: photosystem II protein PsbW class I; KEGG: mar:MAE_54390 photosystem II reaction center 13 kDa protein; Belongs to the Psb28 family. (111 aa)
psbKPhotosystem II protein PsbK; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. (45 aa)
ACK68667.1TIGRFAM: photosystem II protein PsbQ; KEGG: mar:MAE_50080 photosystem II extrinsic protein. (149 aa)
psbJPhotosystem II protein PsbJ; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. (39 aa)
psbLPhotosystem II protein PsbL; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface and is required for correct PSII assembly and/or dimerization. (39 aa)
psbFCytochrome b559, beta subunit; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. (44 aa)
ACK70901.1KEGG: ana:alr0758 hypothetical protein. (109 aa)
psbZPhotosystem II core protein PsbZ; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna; Belongs to the PsbZ family. (62 aa)
ACK71774.1PFAM: protein of unknown function DUF477; KEGG: syn:sll1390 hypothetical protein. (240 aa)
psbTPhotosystem II protein PsbT; Seems to play a role in the dimerization of PSII. Belongs to the PsbT family. (31 aa)
ACK73132.1TIGRFAM: photosystem II S4 domain protein; PFAM: RNA-binding S4 domain protein; KEGG: ava:Ava_1012 RNA-binding S4. (259 aa)
psbIPhotosystem II protein PsbI; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. (38 aa)
thf1Photosystem II biogenesis protein Psp29; May be involved in photosynthetic membrane biogenesis. (226 aa)
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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