STRINGSTRING
ddl ddl mraY mraY ACK69300.1 ACK69300.1 ACK69495.1 ACK69495.1 ACK69646.1 ACK69646.1 ACK69998.1 ACK69998.1 ACK69999.1 ACK69999.1 murA murA ACK70285.1 ACK70285.1 murF murF murC murC murB murB ACK70803.1 ACK70803.1 ACK71301.1 ACK71301.1 ACK71308.1 ACK71308.1 murG murG uppP uppP murE murE ACK72700.1 ACK72700.1 ACK73280.1 ACK73280.1 murD murD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ddlD-alanine/D-alanine ligase; Cell wall formation. (352 aa)
mraYphospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. (365 aa)
ACK69300.1Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. (249 aa)
ACK69495.1PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; KEGG: mar:MAE_19490 putative peptidase. (429 aa)
ACK69646.1PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: mar:MAE_07870 putative carboxypeptidase. (244 aa)
ACK69998.1PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: mar:MAE_56360 cobyric acid synthase like. (262 aa)
ACK69999.1PFAM: Mur ligase middle domain protein; domain of unknown function DUF1727; KEGG: mar:MAE_56370 UDP-N-acetylmuramyl tripeptide synthetase like. (445 aa)
murAUDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (441 aa)
ACK70285.1Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: mar:MAE_05460 penicillin-binding protein. (624 aa)
murFUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. (454 aa)
murCUDP-N-acetylmuramate/alanine ligase; Cell wall formation; Belongs to the MurCDEF family. (495 aa)
murBUDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (316 aa)
ACK70803.1PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; KEGG: mar:MAE_53230 D-alanyl-D-alanine carboxypeptidase. (296 aa)
ACK71301.1KEGG: mar:MAE_21260 penicillin-binding protein; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain. (613 aa)
ACK71308.1Penicillin-binding protein, 1A family; KEGG: mar:MAE_39090 penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase. (811 aa)
murGUndecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (360 aa)
uppPUndecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (320 aa)
murEUDP-N-acetylmuramyl-tripeptide synthetase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. (496 aa)
ACK72700.1KEGG: npu:Npun_R1733 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C. (475 aa)
ACK73280.1PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; KEGG: ter:Tery_4430 peptidase S13, D-Ala-D-Ala carboxypeptidase C. (433 aa)
murDUDP-N-acetylmuramoylalanine/D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. (449 aa)
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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