5 items (Oryza barthii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3EW43	Mitochondrial Rho GTPase. (639 aa)
	A0A0D3FQI4	EF-hand domain-containing protein. (235 aa)
	A0A0D3FRV4	RRM_8 domain-containing protein. (839 aa)
	A0A0D3G777	G domain-containing protein. (928 aa)
	A0A0D3G7S3	Uncharacterized protein. (68 aa)

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3EW43	A0A0D3FRV4	Mitochondrial Rho GTPase.	RRM_8 domain-containing protein.	0.625
A0A0D3EW43	A0A0D3G777	Mitochondrial Rho GTPase.	G domain-containing protein.	0.844
A0A0D3EW43	A0A0D3G7S3	Mitochondrial Rho GTPase.	Uncharacterized protein.	0.625
A0A0D3FQI4	A0A0D3FRV4	EF-hand domain-containing protein.	RRM_8 domain-containing protein.	0.625
A0A0D3FQI4	A0A0D3G777	EF-hand domain-containing protein.	G domain-containing protein.	0.844
A0A0D3FQI4	A0A0D3G7S3	EF-hand domain-containing protein.	Uncharacterized protein.	0.625
A0A0D3FRV4	A0A0D3EW43	RRM_8 domain-containing protein.	Mitochondrial Rho GTPase.	0.625
A0A0D3FRV4	A0A0D3FQI4	RRM_8 domain-containing protein.	EF-hand domain-containing protein.	0.625
A0A0D3FRV4	A0A0D3G777	RRM_8 domain-containing protein.	G domain-containing protein.	0.765
A0A0D3G777	A0A0D3EW43	G domain-containing protein.	Mitochondrial Rho GTPase.	0.844
A0A0D3G777	A0A0D3FQI4	G domain-containing protein.	EF-hand domain-containing protein.	0.844
A0A0D3G777	A0A0D3FRV4	G domain-containing protein.	RRM_8 domain-containing protein.	0.765
A0A0D3G777	A0A0D3G7S3	G domain-containing protein.	Uncharacterized protein.	0.765
A0A0D3G7S3	A0A0D3EW43	Uncharacterized protein.	Mitochondrial Rho GTPase.	0.625
A0A0D3G7S3	A0A0D3FQI4	Uncharacterized protein.	EF-hand domain-containing protein.	0.625
A0A0D3G7S3	A0A0D3G777	Uncharacterized protein.	G domain-containing protein.	0.765