24 items (Oryza barthii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3EQE3	Uncharacterized protein. (1409 aa)
	A0A0D3ERA9	AAA domain-containing protein. (742 aa)
	A0A0D3EVG4	MCU domain-containing protein. (154 aa)
	A0A0D3EW37	WRKY domain-containing protein. (190 aa)
	A0A0D3F6W1	Prohibitin. (282 aa)
	A0A0D3F7J8	Uncharacterized protein. (473 aa)
	A0A0D3F887	AAA domain-containing protein; Belongs to the AAA ATPase family. (663 aa)
	A0A0D3FIW1	Uncharacterized protein. (241 aa)
	A0A0D3FQK0	Uncharacterized protein. (413 aa)
	A0A0D3FQK9	PHB domain-containing protein. (448 aa)
	A0A0D3FR75	Prohibitin. (290 aa)
	A0A0D3FWQ5	Prohibitin. (293 aa)
	A0A0D3FWU0	AAA domain-containing protein; Belongs to the AAA ATPase family. (356 aa)
	A0A0D3FXM3	Uncharacterized protein. (329 aa)
	A0A0D3G8K4	AAA domain-containing protein; Belongs to the AAA ATPase family. (667 aa)
	A0A0D3G8K6	Peptidase_M41 domain-containing protein. (180 aa)
	A0A0D3GDQ4	Uncharacterized protein. (164 aa)
	A0A0D3GKY4	FYVE-type domain-containing protein. (482 aa)
	A0A0D3GPD6	Prohibitin. (289 aa)
	A0A0D3GSN6	FYVE-type domain-containing protein. (520 aa)
	A0A0D3GWJ0	PHB domain-containing protein. (377 aa)
	A0A0D3GWK9	PHB domain-containing protein. (197 aa)
	A0A0D3HHM1	MCU domain-containing protein. (283 aa)
	A0A0D3HQT6	MCU domain-containing protein. (282 aa)

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3EQE3	A0A0D3F6W1	Uncharacterized protein.	Prohibitin.	0.699
A0A0D3EQE3	A0A0D3F7J8	Uncharacterized protein.	Uncharacterized protein.	0.404
A0A0D3EQE3	A0A0D3F887	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.436
A0A0D3EQE3	A0A0D3FQK0	Uncharacterized protein.	Uncharacterized protein.	0.669
A0A0D3EQE3	A0A0D3FQK9	Uncharacterized protein.	PHB domain-containing protein.	0.669
A0A0D3EQE3	A0A0D3FR75	Uncharacterized protein.	Prohibitin.	0.669
A0A0D3EQE3	A0A0D3FWQ5	Uncharacterized protein.	Prohibitin.	0.699
A0A0D3EQE3	A0A0D3FWU0	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.409
A0A0D3EQE3	A0A0D3FXM3	Uncharacterized protein.	Uncharacterized protein.	0.404
A0A0D3EQE3	A0A0D3G8K4	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.426
A0A0D3EQE3	A0A0D3G8K6	Uncharacterized protein.	Peptidase_M41 domain-containing protein.	0.441
A0A0D3EQE3	A0A0D3GPD6	Uncharacterized protein.	Prohibitin.	0.669
A0A0D3EQE3	A0A0D3GWJ0	Uncharacterized protein.	PHB domain-containing protein.	0.713
A0A0D3EQE3	A0A0D3GWK9	Uncharacterized protein.	PHB domain-containing protein.	0.713
A0A0D3ERA9	A0A0D3F6W1	AAA domain-containing protein.	Prohibitin.	0.699
A0A0D3ERA9	A0A0D3F7J8	AAA domain-containing protein.	Uncharacterized protein.	0.404
A0A0D3ERA9	A0A0D3F887	AAA domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.442
A0A0D3ERA9	A0A0D3FQK0	AAA domain-containing protein.	Uncharacterized protein.	0.669
A0A0D3ERA9	A0A0D3FQK9	AAA domain-containing protein.	PHB domain-containing protein.	0.669
A0A0D3ERA9	A0A0D3FR75	AAA domain-containing protein.	Prohibitin.	0.669