(6 nodes) Mixed, incl. Transcription factor RADIALIS-like, and Protein of unknown function DUF3339 network (Oryza barthii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3EYK4	Uncharacterized protein; Belongs to the glycosyl hydrolase 17 family. (70 aa)
	A0A0D3FRJ9	SANT domain-containing protein. (87 aa)
	A0A0D3G285	Uncharacterized protein. (72 aa)
	A0A0D3GDQ3	Uncharacterized protein. (115 aa)
	A0A0D3H4D1	Malectin_like domain-containing protein. (213 aa)
	A0A0D3HGS7	Uncharacterized protein. (242 aa)

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3EYK4	A0A0D3FRJ9	Uncharacterized protein; Belongs to the glycosyl hydrolase 17 family.	SANT domain-containing protein.	0.527
A0A0D3EYK4	A0A0D3G285	Uncharacterized protein; Belongs to the glycosyl hydrolase 17 family.	Uncharacterized protein.	0.560
A0A0D3EYK4	A0A0D3GDQ3	Uncharacterized protein; Belongs to the glycosyl hydrolase 17 family.	Uncharacterized protein.	0.582
A0A0D3EYK4	A0A0D3H4D1	Uncharacterized protein; Belongs to the glycosyl hydrolase 17 family.	Malectin_like domain-containing protein.	0.530
A0A0D3EYK4	A0A0D3HGS7	Uncharacterized protein; Belongs to the glycosyl hydrolase 17 family.	Uncharacterized protein.	0.523
A0A0D3FRJ9	A0A0D3EYK4	SANT domain-containing protein.	Uncharacterized protein; Belongs to the glycosyl hydrolase 17 family.	0.527
A0A0D3FRJ9	A0A0D3G285	SANT domain-containing protein.	Uncharacterized protein.	0.529
A0A0D3FRJ9	A0A0D3GDQ3	SANT domain-containing protein.	Uncharacterized protein.	0.604
A0A0D3FRJ9	A0A0D3H4D1	SANT domain-containing protein.	Malectin_like domain-containing protein.	0.560
A0A0D3FRJ9	A0A0D3HGS7	SANT domain-containing protein.	Uncharacterized protein.	0.505
A0A0D3G285	A0A0D3EYK4	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyl hydrolase 17 family.	0.560
A0A0D3G285	A0A0D3FRJ9	Uncharacterized protein.	SANT domain-containing protein.	0.529
A0A0D3G285	A0A0D3GDQ3	Uncharacterized protein.	Uncharacterized protein.	0.531
A0A0D3G285	A0A0D3H4D1	Uncharacterized protein.	Malectin_like domain-containing protein.	0.523
A0A0D3G285	A0A0D3HGS7	Uncharacterized protein.	Uncharacterized protein.	0.507
A0A0D3GDQ3	A0A0D3EYK4	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyl hydrolase 17 family.	0.582
A0A0D3GDQ3	A0A0D3FRJ9	Uncharacterized protein.	SANT domain-containing protein.	0.604
A0A0D3GDQ3	A0A0D3G285	Uncharacterized protein.	Uncharacterized protein.	0.531
A0A0D3GDQ3	A0A0D3H4D1	Uncharacterized protein.	Malectin_like domain-containing protein.	0.607
A0A0D3GDQ3	A0A0D3HGS7	Uncharacterized protein.	Uncharacterized protein.	0.639