23 items (Oryza barthii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3ELH5	Uncharacterized protein. (214 aa)
	A0A0D3ELJ5	NmrA domain-containing protein. (300 aa)
	A0A0D3ENE9	Uncharacterized protein; Belongs to the complex I LYR family. (86 aa)
	A0A0D3EPV1	Uncharacterized protein. (856 aa)
	A0A0D3ER95	Uncharacterized protein. (238 aa)
	A0A0D3ETP9	Uncharacterized protein. (63 aa)
	A0A0D3EYP8	Uncharacterized protein. (720 aa)
	A0A0D3F9A3	Secretory carrier-associated membrane protein; Probably involved in membrane trafficking. Belongs to the SCAMP family. (230 aa)
	A0A0D3FHG8	Uncharacterized protein. (264 aa)
	A0A0D3FKS2	Secretory carrier-associated membrane protein; Probably involved in membrane trafficking. Belongs to the SCAMP family. (275 aa)
	A0A0D3FKS3	Secretory carrier-associated membrane protein; Probably involved in membrane trafficking. Belongs to the SCAMP family. (221 aa)
	A0A0D3FMB3	Uncharacterized protein. (777 aa)
	A0A0D3FZN7	Secretory carrier-associated membrane protein; Probably involved in membrane trafficking. Belongs to the SCAMP family. (273 aa)
	A0A0D3G724	Uncharacterized protein. (321 aa)
	A0A0D3G9I6	Secretory carrier-associated membrane protein; Probably involved in membrane trafficking. Belongs to the SCAMP family. (210 aa)
	A0A0D3GMB5	Uncharacterized protein. (731 aa)
	A0A0D3GSH0	Secretory carrier-associated membrane protein; Probably involved in membrane trafficking. Belongs to the SCAMP family. (306 aa)
	A0A0D3GTZ6	Uncharacterized protein. (56 aa)
	A0A0D3GWL6	Secretory carrier-associated membrane protein; Probably involved in membrane trafficking. Belongs to the SCAMP family. (253 aa)
	A0A0D3GZS1	Cytochrome b561 domain-containing protein. (234 aa)
	A0A0D3HH08	Uncharacterized protein. (810 aa)
	A0A0D3HW52	Uncharacterized protein. (695 aa)
	A0A0D3HX32	Uncharacterized protein. (769 aa)

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3ELH5	A0A0D3G724	Uncharacterized protein.	Uncharacterized protein.	0.478
A0A0D3ENE9	A0A0D3EYP8	Uncharacterized protein; Belongs to the complex I LYR family.	Uncharacterized protein.	0.435
A0A0D3ENE9	A0A0D3HH08	Uncharacterized protein; Belongs to the complex I LYR family.	Uncharacterized protein.	0.435
A0A0D3ER95	A0A0D3HW52	Uncharacterized protein.	Uncharacterized protein.	0.541
A0A0D3EYP8	A0A0D3ENE9	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.435
A0A0D3G724	A0A0D3ELH5	Uncharacterized protein.	Uncharacterized protein.	0.478
A0A0D3G724	A0A0D3HH08	Uncharacterized protein.	Uncharacterized protein.	0.483
A0A0D3HH08	A0A0D3ENE9	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.435
A0A0D3HH08	A0A0D3G724	Uncharacterized protein.	Uncharacterized protein.	0.483
A0A0D3HW52	A0A0D3ER95	Uncharacterized protein.	Uncharacterized protein.	0.541