70 items (Oryza barthii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3HQS9	Uncharacterized protein. (407 aa)
	A0A0D3FRV4	RRM_8 domain-containing protein. (839 aa)
	A0A0D3FQI4	EF-hand domain-containing protein. (235 aa)
	A0A0D3FQI3	Mitochondrial Rho GTPase. (642 aa)
	A0A0D3FJ37	Uncharacterized protein. (533 aa)
	A0A0D3FJ36	Uncharacterized protein. (604 aa)
	A0A0D3FIV3	Uncharacterized protein. (179 aa)
	A0A0D3FIL4	Mitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes. (173 aa)
	A0A0D3FIL3	Uncharacterized protein. (545 aa)
	A0A0D3FID1	AAA domain-containing protein. (1004 aa)
	A0A0D3FHX5	Uncharacterized protein. (337 aa)
	A0A0D3FGS0	Bac_surface_Ag domain-containing protein. (1273 aa)
	A0A0D3FFD2	Uncharacterized protein; Belongs to the peptidase M16 family. (529 aa)
	A0A0D3FF43	Uncharacterized protein. (277 aa)
	A0A0D3FAM0	TPR_REGION domain-containing protein. (571 aa)
	A0A0D3FAH7	AAA domain-containing protein. (831 aa)
	A0A0D3F9Q4	Uncharacterized protein. (150 aa)
	A0A0D3F9I3	CYTH domain-containing protein. (652 aa)
	A0A0D3F615	Uncharacterized protein. (421 aa)
	A0A0D3F5D8	Uncharacterized protein. (93 aa)
	A0A0D3F4A5	RRM_8 domain-containing protein. (782 aa)
	A0A0D3F093	Uncharacterized protein. (85 aa)
	A0A0D3EYR0	Uncharacterized protein. (149 aa)
	A0A0D3EYH8	Phosphotransferase. (439 aa)
	A0A0D3EY91	PlsC domain-containing protein. (507 aa)
	A0A0D3EXZ7	Uncharacterized protein. (226 aa)
	A0A0D3EW43	Mitochondrial Rho GTPase. (639 aa)
	A0A0D3EVF0	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (279 aa)
	A0A0D3ETN8	Uncharacterized protein. (70 aa)
	A0A0D3ETB4	Uncharacterized protein. (309 aa)
	A0A0D3ERF7	Uncharacterized protein. (80 aa)
	A0A0D3ERE0	AAA domain-containing protein. (824 aa)
	A0A0D3EQN7	Uncharacterized protein. (275 aa)
	A0A0D3EMB8	Uncharacterized protein. (345 aa)
	A0A0D3ELA2	AAA domain-containing protein. (841 aa)
	A0A0D3EIU8	DUF1664 domain-containing protein. (342 aa)
	A0A0D3EIJ4	DUF1664 domain-containing protein. (330 aa)
	A0A0D3HX59	Uncharacterized protein. (160 aa)
	A0A0D3HX57	Uncharacterized protein. (186 aa)
	A0A0D3HW04	Uncharacterized protein. (54 aa)
	A0A0D3HQN4	Uncharacterized protein. (374 aa)
	A0A0D3HQF0	Protein kinase domain-containing protein. (1046 aa)
	A0A0D3HPN7	AAA domain-containing protein. (1190 aa)
	A0A0D3HJY4	Uncharacterized protein. (76 aa)
	A0A0D3HHL6	Uncharacterized protein. (431 aa)
	A0A0D3HHG9	Uncharacterized protein. (1335 aa)
	A0A0D3HH71	HTH myb-type domain-containing protein. (872 aa)
	A0A0D3HD56	Uncharacterized protein. (483 aa)
	A0A0D3H5Y5	Uncharacterized protein. (274 aa)
	A0A0D3H2U0	Uncharacterized protein. (356 aa)
	A0A0D3GXK6	Uncharacterized protein. (435 aa)
	A0A0D3GQR5	ZnF_CDGSH domain-containing protein. (109 aa)
	A0A0D3GKT5	Uncharacterized protein; Belongs to the AAA ATPase family. (260 aa)
	A0A0D3GEG1	AAA domain-containing protein. (949 aa)
	A0A0D3GDA0	Metaxin; Involved in transport of proteins into the mitochondrion. Belongs to the metaxin family. (337 aa)
	A0A0D3GBH7	AAA domain-containing protein; Belongs to the AAA ATPase family. (484 aa)
	A0A0D3GBC6	AAA domain-containing protein. (858 aa)
	A0A0D3GBB6	Uncharacterized protein. (60 aa)
	A0A0D3GB70	Uncharacterized protein. (744 aa)
	A0A0D3GA77	Uncharacterized protein. (275 aa)
	A0A0D3G9M4	Bac_surface_Ag domain-containing protein. (361 aa)
	A0A0D3G9G0	Uncharacterized protein. (419 aa)
	A0A0D3G969	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (315 aa)
	A0A0D3G8U0	Uncharacterized protein. (520 aa)
	A0A0D3G7S3	Uncharacterized protein. (68 aa)
	A0A0D3G726	Uncharacterized protein. (154 aa)
	A0A0D3G5X8	ULP_PROTEASE domain-containing protein. (452 aa)
	A0A0D3G290	DUF1664 domain-containing protein. (345 aa)
	A0A0D3FVN5	Uncharacterized protein. (423 aa)
	A0A0D3FTP5	CYTH domain-containing protein. (969 aa)

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3ELA2	A0A0D3EW43	AAA domain-containing protein.	Mitochondrial Rho GTPase.	0.406
A0A0D3ELA2	A0A0D3EYR0	AAA domain-containing protein.	Uncharacterized protein.	0.582
A0A0D3ELA2	A0A0D3FIL4	AAA domain-containing protein.	Mitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes.	0.582
A0A0D3ELA2	A0A0D3FQI3	AAA domain-containing protein.	Mitochondrial Rho GTPase.	0.406
A0A0D3ELA2	A0A0D3FQI4	AAA domain-containing protein.	EF-hand domain-containing protein.	0.406
A0A0D3ELA2	A0A0D3G726	AAA domain-containing protein.	Uncharacterized protein.	0.582
A0A0D3EMB8	A0A0D3EQN7	Uncharacterized protein.	Uncharacterized protein.	0.781
A0A0D3EMB8	A0A0D3ETB4	Uncharacterized protein.	Uncharacterized protein.	0.781
A0A0D3EMB8	A0A0D3EXZ7	Uncharacterized protein.	Uncharacterized protein.	0.511
A0A0D3EMB8	A0A0D3F093	Uncharacterized protein.	Uncharacterized protein.	0.956
A0A0D3EMB8	A0A0D3F4A5	Uncharacterized protein.	RRM_8 domain-containing protein.	0.801
A0A0D3EMB8	A0A0D3F5D8	Uncharacterized protein.	Uncharacterized protein.	0.956
A0A0D3EMB8	A0A0D3F9Q4	Uncharacterized protein.	Uncharacterized protein.	0.494
A0A0D3EMB8	A0A0D3FAM0	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.470
A0A0D3EMB8	A0A0D3FF43	Uncharacterized protein.	Uncharacterized protein.	0.801
A0A0D3EMB8	A0A0D3FFD2	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase M16 family.	0.472
A0A0D3EMB8	A0A0D3FRV4	Uncharacterized protein.	RRM_8 domain-containing protein.	0.801
A0A0D3EMB8	A0A0D3G7S3	Uncharacterized protein.	Uncharacterized protein.	0.781
A0A0D3EMB8	A0A0D3G8U0	Uncharacterized protein.	Uncharacterized protein.	0.896
A0A0D3EMB8	A0A0D3G9M4	Uncharacterized protein.	Bac_surface_Ag domain-containing protein.	0.882