57 items (Oryza barthii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3H9X8	Uncharacterized protein. (252 aa)
	A0A0D3HGC0	AIG1-type G domain-containing protein. (1008 aa)
	A0A0D3HHG9	Uncharacterized protein. (1335 aa)
	A0A0D3HIG8	Glycos_transf_1 domain-containing protein. (696 aa)
	A0A0D3HME9	Uncharacterized protein. (197 aa)
	A0A0D3HPZ5	Uncharacterized protein; Belongs to the glycosyl hydrolase 1 family. (649 aa)
	A0A0D3HQE6	Uncharacterized protein. (260 aa)
	A0A0D3HQN4	Uncharacterized protein. (374 aa)
	A0A0D3HS18	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (1319 aa)
	A0A0D3G777	G domain-containing protein. (928 aa)
	A0A0D3G9M4	Bac_surface_Ag domain-containing protein. (361 aa)
	A0A0D3HSM4	Uncharacterized protein. (343 aa)
	A0A0D3G9X8	Phosphotransferase. (437 aa)
	A0A0D3GI01	Uncharacterized protein; Belongs to the cytochrome P450 family. (510 aa)
	A0A0D3GI03	Uncharacterized protein; Belongs to the cytochrome P450 family. (493 aa)
	A0A0D3GI05	Uncharacterized protein; Belongs to the cytochrome P450 family. (350 aa)
	A0A0D3GI07	Uncharacterized protein; Belongs to the cytochrome P450 family. (451 aa)
	A0A0D3GI08	Uncharacterized protein; Belongs to the cytochrome P450 family. (466 aa)
	A0A0D3GJ37	Protein kinase domain-containing protein. (644 aa)
	A0A0D3G5X8	ULP_PROTEASE domain-containing protein. (452 aa)
	A0A0D3G409	Uncharacterized protein. (616 aa)
	A0A0D3G3C0	AIG1-type G domain-containing protein. (1178 aa)
	A0A0D3G2G4	Uncharacterized protein. (146 aa)
	A0A0D3FYQ4	Uncharacterized protein; Belongs to the MlaE permease family. (345 aa)
	A0A0D3G6Y2	Phosphotransferase. (442 aa)
	A0A0D3FW44	TPR_REGION domain-containing protein. (394 aa)
	A0A0D3FRJ5	Uncharacterized protein. (234 aa)
	A0A0D3FR18	AIG1-type G domain-containing protein. (1206 aa)
	A0A0D3FP80	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. (196 aa)
	A0A0D3FN22	TPR_REGION domain-containing protein. (586 aa)
	A0A0D3FHJ2	Uncharacterized protein. (188 aa)
	A0A0D3FH95	Uncharacterized protein. (416 aa)
	A0A0D3FGS0	Bac_surface_Ag domain-containing protein. (1273 aa)
	A0A0D3FGP6	Glycos_transf_1 domain-containing protein. (490 aa)
	A0A0D3FG10	AIG1-type G domain-containing protein. (433 aa)
	A0A0D3FFF6	Uncharacterized protein. (476 aa)
	A0A0D3FEZ6	Uncharacterized protein. (485 aa)
	A0A0D3FEI9	RING-type domain-containing protein. (384 aa)
	A0A0D3FCG9	Uncharacterized protein. (205 aa)
	A0A0D3FBT0	Uncharacterized protein. (259 aa)
	A0A0D3F9Q4	Uncharacterized protein. (150 aa)
	A0A0D3F1Z7	POTRA domain-containing protein. (617 aa)
	A0A0D3EZA0	Uncharacterized protein. (146 aa)
	A0A0D3EZ58	Uncharacterized protein. (106 aa)
	A0A0D3ETV6	Phosphotransferase. (506 aa)
	A0A0D3ETH5	4-hydroxy-4-methyl-2-oxoglutarate aldolase; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions. Belongs to the class II aldolase/RraA-like family. (733 aa)
	A0A0D3EQI0	Uncharacterized protein. (371 aa)
	A0A0D3ENM8	AIG1-type G domain-containing protein. (5436 aa)
	A0A0D3EMJ6	Uncharacterized protein. (263 aa)
	A0A0D3ELT4	Uncharacterized protein. (425 aa)
	A0A0D3EL86	Uncharacterized protein. (250 aa)
	A0A0D3GLT7	Uncharacterized protein. (272 aa)
	A0A0D3GMJ9	TPR_REGION domain-containing protein. (547 aa)
	A0A0D3GSC6	Uncharacterized protein. (287 aa)
	A0A0D3GUA9	Uncharacterized protein. (336 aa)
	A0A0D3H2P8	ANK_REP_REGION domain-containing protein. (329 aa)
	A0A0D3H9W4	Uncharacterized protein. (698 aa)

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3EL86	A0A0D3G777	Uncharacterized protein.	G domain-containing protein.	0.430
A0A0D3EL86	A0A0D3H9W4	Uncharacterized protein.	Uncharacterized protein.	0.461
A0A0D3EL86	A0A0D3H9X8	Uncharacterized protein.	Uncharacterized protein.	0.461
A0A0D3EL86	A0A0D3HQE6	Uncharacterized protein.	Uncharacterized protein.	0.450
A0A0D3EL86	A0A0D3HS18	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.585
A0A0D3ELT4	A0A0D3FYQ4	Uncharacterized protein.	Uncharacterized protein; Belongs to the MlaE permease family.	0.457
A0A0D3EMJ6	A0A0D3HSM4	Uncharacterized protein.	Uncharacterized protein.	0.471
A0A0D3ENM8	A0A0D3FG10	AIG1-type G domain-containing protein.	AIG1-type G domain-containing protein.	0.876
A0A0D3ENM8	A0A0D3FGS0	AIG1-type G domain-containing protein.	Bac_surface_Ag domain-containing protein.	0.681
A0A0D3ENM8	A0A0D3G5X8	AIG1-type G domain-containing protein.	ULP_PROTEASE domain-containing protein.	0.681
A0A0D3ENM8	A0A0D3GUA9	AIG1-type G domain-containing protein.	Uncharacterized protein.	0.425
A0A0D3ENM8	A0A0D3H2P8	AIG1-type G domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.458
A0A0D3ENM8	A0A0D3HHG9	AIG1-type G domain-containing protein.	Uncharacterized protein.	0.681
A0A0D3ENM8	A0A0D3HQN4	AIG1-type G domain-containing protein.	Uncharacterized protein.	0.681
A0A0D3ENM8	A0A0D3HSM4	AIG1-type G domain-containing protein.	Uncharacterized protein.	0.428
A0A0D3ETH5	A0A0D3ETV6	4-hydroxy-4-methyl-2-oxoglutarate aldolase; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions. Belongs to the class II aldolase/RraA-like family.	Phosphotransferase.	0.799
A0A0D3ETH5	A0A0D3G6Y2	4-hydroxy-4-methyl-2-oxoglutarate aldolase; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions. Belongs to the class II aldolase/RraA-like family.	Phosphotransferase.	0.885
A0A0D3ETH5	A0A0D3G9X8	4-hydroxy-4-methyl-2-oxoglutarate aldolase; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions. Belongs to the class II aldolase/RraA-like family.	Phosphotransferase.	0.798
A0A0D3ETV6	A0A0D3ETH5	Phosphotransferase.	4-hydroxy-4-methyl-2-oxoglutarate aldolase; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions. Belongs to the class II aldolase/RraA-like family.	0.799
A0A0D3ETV6	A0A0D3G6Y2	Phosphotransferase.	Phosphotransferase.	0.883