(33 nodes) Response to UV-B network (Oryza barthii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3EZS6	Uncharacterized protein. (136 aa)
	A0A0D3EK57	VOC domain-containing protein. (214 aa)
	A0A0D3EML3	Uncharacterized protein. (265 aa)
	A0A0D3EN40	ABC1 domain-containing protein. (624 aa)
	A0A0D3ET60	Lipase_3 domain-containing protein. (469 aa)
	A0A0D3EU70	UmuC domain-containing protein. (635 aa)
	A0A0D3F065	Uncharacterized protein. (712 aa)
	A0A0D3F6C1	Uncharacterized protein. (453 aa)
	A0A0D3F713	Uncharacterized protein. (234 aa)
	A0A0D3FB04	Uncharacterized protein. (1325 aa)
	A0A0D3FET6	Uncharacterized protein. (176 aa)
	A0A0D3FFJ2	Sod_Cu domain-containing protein. (184 aa)
	A0A0D3FHG4	Uncharacterized protein. (508 aa)
	A0A0D3FHH9	Uncharacterized protein. (331 aa)
	A0A0D3FMC9	VQ domain-containing protein. (143 aa)
	A0A0D3FNA6	Uncharacterized protein. (455 aa)
	A0A0D3FTU1	Uncharacterized protein. (606 aa)
	A0A0D3FVX8	Uncharacterized protein. (515 aa)
	A0A0D3FW31	Uncharacterized protein. (453 aa)
	A0A0D3FXZ2	Uncharacterized protein. (418 aa)
	A0A0D3FYF5	VOC domain-containing protein. (175 aa)
	A0A0D3G2J5	Uncharacterized protein. (668 aa)
	A0A0D3G3S8	VOC domain-containing protein. (206 aa)
	A0A0D3GEA6	Uncharacterized protein. (167 aa)
	A0A0D3GK68	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1100 aa)
	A0A0D3GV47	AB hydrolase-1 domain-containing protein. (443 aa)
	A0A0D3GZH0	Uncharacterized protein. (520 aa)
	A0A0D3H388	Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (211 aa)
	A0A0D3H507	Uncharacterized protein. (436 aa)
	A0A0D3HFP1	HHH_2 domain-containing protein. (423 aa)
	A0A0D3HPP5	Uncharacterized protein. (391 aa)
	A0A0D3HPR0	Uncharacterized protein. (427 aa)
	A0A0D3HQ71	Uncharacterized protein. (450 aa)

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3EU70	A0A0D3GK68	UmuC domain-containing protein.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.994
A0A0D3EU70	A0A0D3HFP1	UmuC domain-containing protein.	HHH_2 domain-containing protein.	0.554
A0A0D3EZS6	A0A0D3F6C1	Uncharacterized protein.	Uncharacterized protein.	0.890
A0A0D3EZS6	A0A0D3FB04	Uncharacterized protein.	Uncharacterized protein.	0.893
A0A0D3EZS6	A0A0D3FW31	Uncharacterized protein.	Uncharacterized protein.	0.890
A0A0D3F6C1	A0A0D3EZS6	Uncharacterized protein.	Uncharacterized protein.	0.890
A0A0D3F6C1	A0A0D3FB04	Uncharacterized protein.	Uncharacterized protein.	0.952
A0A0D3FB04	A0A0D3EZS6	Uncharacterized protein.	Uncharacterized protein.	0.893
A0A0D3FB04	A0A0D3F6C1	Uncharacterized protein.	Uncharacterized protein.	0.952
A0A0D3FB04	A0A0D3FW31	Uncharacterized protein.	Uncharacterized protein.	0.952
A0A0D3FFJ2	A0A0D3H388	Sod_Cu domain-containing protein.	Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.	0.937
A0A0D3FVX8	A0A0D3HQ71	Uncharacterized protein.	Uncharacterized protein.	0.400
A0A0D3FW31	A0A0D3EZS6	Uncharacterized protein.	Uncharacterized protein.	0.890
A0A0D3FW31	A0A0D3FB04	Uncharacterized protein.	Uncharacterized protein.	0.952
A0A0D3GK68	A0A0D3EU70	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	UmuC domain-containing protein.	0.994
A0A0D3GK68	A0A0D3HFP1	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	HHH_2 domain-containing protein.	0.565
A0A0D3H388	A0A0D3FFJ2	Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.	Sod_Cu domain-containing protein.	0.937
A0A0D3HFP1	A0A0D3EU70	HHH_2 domain-containing protein.	UmuC domain-containing protein.	0.554
A0A0D3HFP1	A0A0D3GK68	HHH_2 domain-containing protein.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.565
A0A0D3HQ71	A0A0D3FVX8	Uncharacterized protein.	Uncharacterized protein.	0.400