47 items (Oryza barthii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3ES67	Uncharacterized protein; Belongs to the endosulfine family. (142 aa)
	A0A0D3EQW5	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (507 aa)
	A0A0D3EQL7	Uncharacterized protein. (772 aa)
	A0A0D3EPI6	LisH domain-containing protein. (1169 aa)
	A0A0D3ENC5	SMK-1 domain-containing protein. (886 aa)
	A0A0D3ELS2	Uncharacterized protein; Belongs to the endosulfine family. (126 aa)
	A0A0D3EKQ6	Uncharacterized protein. (210 aa)
	A0A0D3HGV9	Uncharacterized protein. (118 aa)
	A0A0D3G5B8	Uncharacterized protein. (125 aa)
	A0A0D3G4I1	Uncharacterized protein. (209 aa)
	A0A0D3G3G3	Uncharacterized protein. (796 aa)
	A0A0D3G4A3	Uncharacterized protein. (93 aa)
	A0A0D3HDL3	Uncharacterized protein. (212 aa)
	A0A0D3HEP8	Uncharacterized protein. (578 aa)
	A0A0D3GHD0	Uncharacterized protein. (206 aa)
	A0A0D3GHB9	Uncharacterized protein. (158 aa)
	A0A0D3GHB8	Uncharacterized protein. (207 aa)
	A0A0D3GFP1	Uncharacterized protein. (297 aa)
	A0A0D3GEB6	Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (411 aa)
	A0A0D3GAW9	Uncharacterized protein; Belongs to the endosulfine family. (180 aa)
	A0A0D3G8U9	Uncharacterized protein. (185 aa)
	A0A0D3G5P7	Uncharacterized protein. (165 aa)
	A0A0D3GHD3	Uncharacterized protein. (206 aa)
	A0A0D3FA69	ANK_REP_REGION domain-containing protein. (526 aa)
	A0A0D3F7N7	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (443 aa)
	A0A0D3F642	Uncharacterized protein. (730 aa)
	A0A0D3F377	Uncharacterized protein. (121 aa)
	A0A0D3F376	Uncharacterized protein. (125 aa)
	A0A0D3FHC9	Uncharacterized protein. (100 aa)
	A0A0D3FGZ1	ANK_REP_REGION domain-containing protein. (504 aa)
	A0A0D3FHD0	Uncharacterized protein. (201 aa)
	A0A0D3FHF5	Bet_v_1 domain-containing protein; Belongs to the BetVI family. (160 aa)
	A0A0D3FTV2	Uncharacterized protein. (118 aa)
	A0A0D3FVR3	WD_REPEATS_REGION domain-containing protein. (680 aa)
	A0A0D3FWT4	Bet_v_1 domain-containing protein. (157 aa)
	A0A0D3G0G8	Uncharacterized protein. (629 aa)
	A0A0D3F2S2	Uncharacterized protein. (333 aa)
	A0A0D3F2P0	Uncharacterized protein. (210 aa)
	A0A0D3F2M2	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (524 aa)
	A0A0D3F1V6	Uncharacterized protein. (466 aa)
	A0A0D3EVS2	Uncharacterized protein. (208 aa)
	A0A0D3GHW4	Uncharacterized protein. (204 aa)
	A0A0D3GHX3	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (464 aa)
	A0A0D3GYZ4	FHA domain-containing protein. (421 aa)
	A0A0D3H2R9	ANK_REP_REGION domain-containing protein. (555 aa)
	A0A0D3H444	Uncharacterized protein. (587 aa)
	A0A0D3H8Z4	ANK_REP_REGION domain-containing protein. (562 aa)

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3ENC5	A0A0D3GEB6	SMK-1 domain-containing protein.	Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.	0.936
A0A0D3ENC5	A0A0D3GFP1	SMK-1 domain-containing protein.	Uncharacterized protein.	0.969
A0A0D3EPI6	A0A0D3EQW5	LisH domain-containing protein.	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.930
A0A0D3EPI6	A0A0D3F1V6	LisH domain-containing protein.	Uncharacterized protein.	0.880
A0A0D3EPI6	A0A0D3F2M2	LisH domain-containing protein.	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.930
A0A0D3EPI6	A0A0D3F2S2	LisH domain-containing protein.	Uncharacterized protein.	0.489
A0A0D3EPI6	A0A0D3F7N7	LisH domain-containing protein.	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.930
A0A0D3EPI6	A0A0D3GEB6	LisH domain-containing protein.	Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.	0.943
A0A0D3EPI6	A0A0D3GFP1	LisH domain-containing protein.	Uncharacterized protein.	0.477
A0A0D3EPI6	A0A0D3GHX3	LisH domain-containing protein.	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.930
A0A0D3EPI6	A0A0D3HEP8	LisH domain-containing protein.	Uncharacterized protein.	0.880
A0A0D3EQL7	A0A0D3GEB6	Uncharacterized protein.	Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.	0.419
A0A0D3EQW5	A0A0D3EPI6	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	LisH domain-containing protein.	0.930
A0A0D3EQW5	A0A0D3F1V6	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	Uncharacterized protein.	0.797
A0A0D3EQW5	A0A0D3F2S2	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	Uncharacterized protein.	0.537
A0A0D3EQW5	A0A0D3F7N7	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.402
A0A0D3EQW5	A0A0D3GEB6	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.	0.491
A0A0D3EQW5	A0A0D3GFP1	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	Uncharacterized protein.	0.575
A0A0D3EQW5	A0A0D3H444	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	Uncharacterized protein.	0.974
A0A0D3EQW5	A0A0D3HEP8	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	Uncharacterized protein.	0.797