(10 nodes) Peroxisomal importomer complex network (Oryza barthii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3HB01	Uncharacterized protein. (428 aa)
	A0A0D3G267	Pex14_N domain-containing protein. (501 aa)
	A0A0D3HB54	F-box domain-containing protein. (118 aa)
	A0A0D3HB49	Uncharacterized protein. (1399 aa)
	A0A0D3HEI3	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (394 aa)
	A0A0D3HB08	Uncharacterized protein. (201 aa)
	A0A0D3EIQ1	Pex14_N domain-containing protein. (451 aa)
	A0A0D3FPX6	Uncharacterized protein. (270 aa)
	A0A0D3HB05	Uncharacterized protein. (132 aa)
	A0A0D3GB73	Pex14_N domain-containing protein. (271 aa)

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3EIQ1	A0A0D3FPX6	Pex14_N domain-containing protein.	Uncharacterized protein.	0.960
A0A0D3EIQ1	A0A0D3G267	Pex14_N domain-containing protein.	Pex14_N domain-containing protein.	0.937
A0A0D3EIQ1	A0A0D3HEI3	Pex14_N domain-containing protein.	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.891
A0A0D3FPX6	A0A0D3EIQ1	Uncharacterized protein.	Pex14_N domain-containing protein.	0.960
A0A0D3FPX6	A0A0D3G267	Uncharacterized protein.	Pex14_N domain-containing protein.	0.960
A0A0D3FPX6	A0A0D3GB73	Uncharacterized protein.	Pex14_N domain-containing protein.	0.898
A0A0D3FPX6	A0A0D3HB01	Uncharacterized protein.	Uncharacterized protein.	0.761
A0A0D3FPX6	A0A0D3HB05	Uncharacterized protein.	Uncharacterized protein.	0.761
A0A0D3FPX6	A0A0D3HB08	Uncharacterized protein.	Uncharacterized protein.	0.761
A0A0D3FPX6	A0A0D3HB49	Uncharacterized protein.	Uncharacterized protein.	0.761
A0A0D3FPX6	A0A0D3HB54	Uncharacterized protein.	F-box domain-containing protein.	0.761
A0A0D3G267	A0A0D3EIQ1	Pex14_N domain-containing protein.	Pex14_N domain-containing protein.	0.937
A0A0D3G267	A0A0D3FPX6	Pex14_N domain-containing protein.	Uncharacterized protein.	0.960
A0A0D3G267	A0A0D3HEI3	Pex14_N domain-containing protein.	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.891
A0A0D3GB73	A0A0D3FPX6	Pex14_N domain-containing protein.	Uncharacterized protein.	0.898
A0A0D3GB73	A0A0D3HEI3	Pex14_N domain-containing protein.	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.879
A0A0D3HB01	A0A0D3FPX6	Uncharacterized protein.	Uncharacterized protein.	0.761
A0A0D3HB01	A0A0D3HEI3	Uncharacterized protein.	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.869
A0A0D3HB05	A0A0D3FPX6	Uncharacterized protein.	Uncharacterized protein.	0.761
A0A0D3HB05	A0A0D3HEI3	Uncharacterized protein.	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.869