14 items (Oryza barthii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3FQ18	Uncharacterized protein. (303 aa)
	A0A0D3FZ31	AAA domain-containing protein. (335 aa)
	A0A0D3GA22	DNA_pol3_gamma3 domain-containing protein. (716 aa)
	A0A0D3GVU8	AAA domain-containing protein. (795 aa)
	A0A0D3HS00	AAA domain-containing protein. (339 aa)
	A0A0D3HN71	Replication factor C subunit 1. (979 aa)
	A0A0D3HSH9	DNA_pol3_gamma3 domain-containing protein. (1174 aa)
	A0A0D3HK17	DNA_pol3_gamma3 domain-containing protein. (1183 aa)
	A0A0D3HGW4	Uncharacterized protein. (594 aa)
	A0A0D3ETN4	DNA_pol3_gamma3 domain-containing protein. (873 aa)
	A0A0D3F9F8	Uncharacterized protein. (721 aa)
	A0A0D3FB38	AAA domain-containing protein. (361 aa)
	A0A0D3FGH9	AAA domain-containing protein. (1233 aa)
	A0A0D3HTF8	AAA domain-containing protein. (971 aa)

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3ETN4	A0A0D3F9F8	DNA_pol3_gamma3 domain-containing protein.	Uncharacterized protein.	0.957
A0A0D3ETN4	A0A0D3FB38	DNA_pol3_gamma3 domain-containing protein.	AAA domain-containing protein.	0.986
A0A0D3ETN4	A0A0D3FGH9	DNA_pol3_gamma3 domain-containing protein.	AAA domain-containing protein.	0.933
A0A0D3ETN4	A0A0D3FQ18	DNA_pol3_gamma3 domain-containing protein.	Uncharacterized protein.	0.957
A0A0D3ETN4	A0A0D3FZ31	DNA_pol3_gamma3 domain-containing protein.	AAA domain-containing protein.	0.969
A0A0D3ETN4	A0A0D3GVU8	DNA_pol3_gamma3 domain-containing protein.	AAA domain-containing protein.	0.430
A0A0D3ETN4	A0A0D3HGW4	DNA_pol3_gamma3 domain-containing protein.	Uncharacterized protein.	0.957
A0A0D3ETN4	A0A0D3HK17	DNA_pol3_gamma3 domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.439
A0A0D3ETN4	A0A0D3HN71	DNA_pol3_gamma3 domain-containing protein.	Replication factor C subunit 1.	0.933
A0A0D3ETN4	A0A0D3HSH9	DNA_pol3_gamma3 domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.440
A0A0D3ETN4	A0A0D3HTF8	DNA_pol3_gamma3 domain-containing protein.	AAA domain-containing protein.	0.438
A0A0D3F9F8	A0A0D3ETN4	Uncharacterized protein.	DNA_pol3_gamma3 domain-containing protein.	0.957
A0A0D3F9F8	A0A0D3FB38	Uncharacterized protein.	AAA domain-containing protein.	0.995
A0A0D3F9F8	A0A0D3FGH9	Uncharacterized protein.	AAA domain-containing protein.	0.973
A0A0D3F9F8	A0A0D3FQ18	Uncharacterized protein.	Uncharacterized protein.	0.873
A0A0D3F9F8	A0A0D3FZ31	Uncharacterized protein.	AAA domain-containing protein.	0.994
A0A0D3F9F8	A0A0D3GA22	Uncharacterized protein.	DNA_pol3_gamma3 domain-containing protein.	0.957
A0A0D3F9F8	A0A0D3GVU8	Uncharacterized protein.	AAA domain-containing protein.	0.957
A0A0D3F9F8	A0A0D3HGW4	Uncharacterized protein.	Uncharacterized protein.	0.888
A0A0D3F9F8	A0A0D3HK17	Uncharacterized protein.	DNA_pol3_gamma3 domain-containing protein.	0.957