29 items (Oryza barthii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3GKT7	Uncharacterized protein. (94 aa)
	A0A0D3FNS2	Uncharacterized protein. (214 aa)
	A0A0D3FMN6	ATP-synt_ab_N domain-containing protein. (243 aa)
	A0A0D3GAJ4	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. (1216 aa)
	A0A0D3EQW4	Uncharacterized protein. (122 aa)
	A0A0D3ESL6	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. (557 aa)
	A0A0D3ETE9	Uncharacterized protein. (156 aa)
	A0A0D3GR71	Uncharacterized protein. (699 aa)
	A0A0D3GRM2	Uncharacterized protein. (358 aa)
	A0A0D3F1R9	Ubiquitin_4 domain-containing protein. (430 aa)
	A0A0D3F1F1	Uncharacterized protein. (95 aa)
	A0A0D3FTU5	Uncharacterized protein. (368 aa)
	A0A0D3GJ91	Uncharacterized protein. (225 aa)
	A0A0D3FGX3	Uncharacterized protein; Belongs to the ATPase B chain family. (211 aa)
	A0A0D3FJ51	Uncharacterized protein. (73 aa)
	A0A0D3GRM3	HRDC domain-containing protein. (861 aa)
	A0A0D3F6N0	ATP-synt_ab domain-containing protein. (93 aa)
	A0A0D3G1T7	Smr domain-containing protein. (848 aa)
	A0A0D3G1T9	Smr domain-containing protein. (753 aa)
	A0A0D3GA54	Uncharacterized protein. (125 aa)
	A0A0D3F044	Uncharacterized protein. (559 aa)
	A0A0D3GSL1	ATP-synt_C domain-containing protein; Belongs to the ATPase C chain family. (124 aa)
	A0A0D3GXZ8	Uncharacterized protein. (69 aa)
	A0A0D3H4A0	Uncharacterized protein; Belongs to the SWEET sugar transporter family. (635 aa)
	A0A0D3HC74	Uncharacterized protein. (577 aa)
	A0A0D3FMA3	Uncharacterized protein. (1229 aa)
	A0A0D3HDU1	Uncharacterized protein. (782 aa)
	A0A0D3HFH6	DNA_MISMATCH_REPAIR_2 domain-containing protein. (832 aa)
	A0A0D3HSY2	DUF1082 domain-containing protein. (108 aa)

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3EQW4	A0A0D3ETE9	Uncharacterized protein.	Uncharacterized protein.	0.819
A0A0D3EQW4	A0A0D3GA54	Uncharacterized protein.	Uncharacterized protein.	0.905
A0A0D3ESL6	A0A0D3F044	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.410
A0A0D3ESL6	A0A0D3F6N0	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP-synt_ab domain-containing protein.	0.994
A0A0D3ESL6	A0A0D3FGX3	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein; Belongs to the ATPase B chain family.	0.964
A0A0D3ESL6	A0A0D3FMN6	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP-synt_ab_N domain-containing protein.	0.994
A0A0D3ESL6	A0A0D3FNS2	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.984
A0A0D3ESL6	A0A0D3GAJ4	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.817
A0A0D3ESL6	A0A0D3GJ91	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.984
A0A0D3ESL6	A0A0D3GKT7	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.984
A0A0D3ESL6	A0A0D3GR71	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.990
A0A0D3ESL6	A0A0D3GRM2	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.992
A0A0D3ESL6	A0A0D3GSL1	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP-synt_C domain-containing protein; Belongs to the ATPase C chain family.	0.959
A0A0D3ESL6	A0A0D3GXZ8	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.988
A0A0D3ESL6	A0A0D3H4A0	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein; Belongs to the SWEET sugar transporter family.	0.992
A0A0D3ESL6	A0A0D3HC74	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.992
A0A0D3ESL6	A0A0D3HDU1	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.990
A0A0D3ETE9	A0A0D3EQW4	Uncharacterized protein.	Uncharacterized protein.	0.819
A0A0D3F044	A0A0D3ESL6	Uncharacterized protein.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.410
A0A0D3F044	A0A0D3FJ51	Uncharacterized protein.	Uncharacterized protein.	0.410