27 items (Oryza barthii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3EQJ8	Uncharacterized protein. (2070 aa)
	A0A0D3ETH6	Tr-type G domain-containing protein. (853 aa)
	A0A0D3ETV3	Tr-type G domain-containing protein. (841 aa)
	A0A0D3EU27	Tr-type G domain-containing protein. (656 aa)
	A0A0D3F0Y1	Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (596 aa)
	A0A0D3F3Q5	Tr-type G domain-containing protein. (711 aa)
	A0A0D3F4U3	Tr-type G domain-containing protein. (469 aa)
	A0A0D3F5Q7	Tr-type G domain-containing protein. (843 aa)
	A0A0D3F748	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (467 aa)
	A0A0D3FEJ0	Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (447 aa)
	A0A0D3FEJ1	Uncharacterized protein. (918 aa)
	A0A0D3FKH0	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (770 aa)
	A0A0D3FLV7	Tr-type G domain-containing protein. (1029 aa)
	A0A0D3FRE9	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (453 aa)
	A0A0D3FS13	Tr-type G domain-containing protein. (843 aa)
	A0A0D3FTK2	Tr-type G domain-containing protein. (548 aa)
	A0A0D3FYE6	Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (702 aa)
	A0A0D3FZN0	Tr-type G domain-containing protein. (650 aa)
	A0A0D3G1R1	Uncharacterized protein. (729 aa)
	A0A0D3GB48	Tr-type G domain-containing protein. (982 aa)
	A0A0D3GBK4	Tr-type G domain-containing protein. (1208 aa)
	A0A0D3GCR3	Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (768 aa)
	A0A0D3GIJ2	Tr-type G domain-containing protein. (898 aa)
	A0A0D3H8X2	Tr-type G domain-containing protein. (716 aa)
	A0A0D3HS05	Tr-type G domain-containing protein. (464 aa)
	A0A0D3HUT5	Tr-type G domain-containing protein. (847 aa)
	A0A0D3HWK4	Tr-type G domain-containing protein. (464 aa)

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3EQJ8	A0A0D3ETH6	Uncharacterized protein.	Tr-type G domain-containing protein.	0.598
A0A0D3EQJ8	A0A0D3ETV3	Uncharacterized protein.	Tr-type G domain-containing protein.	0.598
A0A0D3EQJ8	A0A0D3F4U3	Uncharacterized protein.	Tr-type G domain-containing protein.	0.517
A0A0D3EQJ8	A0A0D3F5Q7	Uncharacterized protein.	Tr-type G domain-containing protein.	0.598
A0A0D3EQJ8	A0A0D3F748	Uncharacterized protein.	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.574
A0A0D3EQJ8	A0A0D3FKH0	Uncharacterized protein.	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	0.605
A0A0D3EQJ8	A0A0D3FLV7	Uncharacterized protein.	Tr-type G domain-containing protein.	0.615
A0A0D3EQJ8	A0A0D3FRE9	Uncharacterized protein.	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.574
A0A0D3EQJ8	A0A0D3FS13	Uncharacterized protein.	Tr-type G domain-containing protein.	0.598
A0A0D3EQJ8	A0A0D3FTK2	Uncharacterized protein.	Tr-type G domain-containing protein.	0.517
A0A0D3EQJ8	A0A0D3FYE6	Uncharacterized protein.	Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	0.605
A0A0D3EQJ8	A0A0D3GIJ2	Uncharacterized protein.	Tr-type G domain-containing protein.	0.605
A0A0D3EQJ8	A0A0D3HS05	Uncharacterized protein.	Tr-type G domain-containing protein.	0.815
A0A0D3EQJ8	A0A0D3HUT5	Uncharacterized protein.	Tr-type G domain-containing protein.	0.864
A0A0D3EQJ8	A0A0D3HWK4	Uncharacterized protein.	Tr-type G domain-containing protein.	0.815
A0A0D3ETH6	A0A0D3EQJ8	Tr-type G domain-containing protein.	Uncharacterized protein.	0.598
A0A0D3ETH6	A0A0D3F4U3	Tr-type G domain-containing protein.	Tr-type G domain-containing protein.	0.465
A0A0D3ETH6	A0A0D3F748	Tr-type G domain-containing protein.	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.887
A0A0D3ETH6	A0A0D3FEJ0	Tr-type G domain-containing protein.	Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.704
A0A0D3ETH6	A0A0D3FEJ1	Tr-type G domain-containing protein.	Uncharacterized protein.	0.704