(33 nodes) Endonuclease/exonuclease/phosphatase network (Oryza barthii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3ETC2	IPPc domain-containing protein. (649 aa)
	A0A0D3HTQ1	RanBP2-type domain-containing protein. (431 aa)
	A0A0D3HTB0	DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (380 aa)
	A0A0D3HDU0	IPPc domain-containing protein. (591 aa)
	A0A0D3HDL0	Endo/exonuclease/phosphatase domain-containing protein. (607 aa)
	A0A0D3HC18	Endo/exonuclease/phosphatase domain-containing protein. (512 aa)
	A0A0D3H9E2	Endo/exonuclease/phosphatase domain-containing protein. (632 aa)
	A0A0D3H8J7	Toprim domain-containing protein. (1781 aa)
	A0A0D3H6I1	IPPc domain-containing protein. (337 aa)
	A0A0D3EKE6	IPPc domain-containing protein. (536 aa)
	A0A0D3ER43	Endo/exonuclease/phosphatase domain-containing protein. (672 aa)
	A0A0D3FFZ7	IPPc domain-containing protein. (564 aa)
	A0A0D3FE90	Uncharacterized protein. (607 aa)
	A0A0D3FIQ7	Endo/exonuclease/phosphatase domain-containing protein. (320 aa)
	A0A0D3FLG2	IPPc domain-containing protein. (310 aa)
	A0A0D3FM37	IPPc domain-containing protein. (644 aa)
	A0A0D3FQ28	IPPc domain-containing protein. (513 aa)
	A0A0D3G2I5	IPPc domain-containing protein. (530 aa)
	A0A0D3G5G3	Endo/exonuclease/phosphatase domain-containing protein. (272 aa)
	A0A0D3G772	Endo/exonuclease/phosphatase domain-containing protein. (364 aa)
	A0A0D3G970	IPPc domain-containing protein. (563 aa)
	A0A0D3GA72	IPPc domain-containing protein. (613 aa)
	A0A0D3GED6	IPPc domain-containing protein. (532 aa)
	A0A0D3GF42	Endo/exonuclease/phosphatase domain-containing protein. (444 aa)
	A0A0D3GMV7	IPPc domain-containing protein. (579 aa)
	A0A0D3GU80	Endo/exonuclease/phosphatase domain-containing protein. (362 aa)
	A0A0D3H0E7	IPPc domain-containing protein. (445 aa)
	A0A0D3H2B3	IPPc domain-containing protein. (991 aa)
	A0A0D3FE31	IPPc domain-containing protein. (575 aa)
	A0A0D3FAJ7	IPPc domain-containing protein. (582 aa)
	A0A0D3F553	IPPc domain-containing protein. (806 aa)
	A0A0D3EVE4	IPPc domain-containing protein. (512 aa)
	A0A0D3EV46	DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (794 aa)

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3EKE6	A0A0D3FFZ7	IPPc domain-containing protein.	IPPc domain-containing protein.	0.834
A0A0D3EKE6	A0A0D3H0E7	IPPc domain-containing protein.	IPPc domain-containing protein.	0.838
A0A0D3EKE6	A0A0D3H6I1	IPPc domain-containing protein.	IPPc domain-containing protein.	0.832
A0A0D3EV46	A0A0D3H9E2	DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family.	Endo/exonuclease/phosphatase domain-containing protein.	0.875
A0A0D3FE90	A0A0D3HDL0	Uncharacterized protein.	Endo/exonuclease/phosphatase domain-containing protein.	0.857
A0A0D3FFZ7	A0A0D3EKE6	IPPc domain-containing protein.	IPPc domain-containing protein.	0.834
A0A0D3H0E7	A0A0D3EKE6	IPPc domain-containing protein.	IPPc domain-containing protein.	0.838
A0A0D3H6I1	A0A0D3EKE6	IPPc domain-containing protein.	IPPc domain-containing protein.	0.832
A0A0D3H9E2	A0A0D3EV46	Endo/exonuclease/phosphatase domain-containing protein.	DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family.	0.875
A0A0D3H9E2	A0A0D3HTB0	Endo/exonuclease/phosphatase domain-containing protein.	DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family.	0.451
A0A0D3HDL0	A0A0D3FE90	Endo/exonuclease/phosphatase domain-containing protein.	Uncharacterized protein.	0.857
A0A0D3HTB0	A0A0D3H9E2	DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family.	Endo/exonuclease/phosphatase domain-containing protein.	0.451