(39 nodes) Major facilitator superfamily network (Oryza barthii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3FQH2	MFS domain-containing protein. (470 aa)
	A0A0D3FXM1	Nodulin-like domain-containing protein. (582 aa)
	A0A0D3G5A7	Uncharacterized protein. (487 aa)
	A0A0D3G5S9	Uncharacterized protein. (448 aa)
	A0A0D3HHV8	MFS domain-containing protein. (2025 aa)
	A0A0D3G8E3	MFS domain-containing protein. (403 aa)
	A0A0D3GCB1	SPX domain-containing protein. (698 aa)
	A0A0D3GDG0	Nodulin-like domain-containing protein. (567 aa)
	A0A0D3GDG7	MFS domain-containing protein. (372 aa)
	A0A0D3GMZ2	MFS domain-containing protein. (415 aa)
	A0A0D3GNL0	MFS domain-containing protein. (487 aa)
	A0A0D3GSM1	MFS domain-containing protein. (504 aa)
	A0A0D3GWH6	MFS domain-containing protein. (499 aa)
	A0A0D3H058	MFS domain-containing protein. (1052 aa)
	A0A0D3H645	MFS domain-containing protein. (983 aa)
	A0A0D3H647	MFS domain-containing protein. (189 aa)
	A0A0D3H917	Uncharacterized protein. (693 aa)
	A0A0D3HIB0	MFS domain-containing protein. (451 aa)
	A0A0D3H9X2	Uncharacterized protein. (485 aa)
	A0A0D3HA97	MFS domain-containing protein. (591 aa)
	A0A0D3FY48	MFS domain-containing protein. (554 aa)
	A0A0D3FYR8	MFS domain-containing protein. (515 aa)
	A0A0D3FZ60	SPX domain-containing protein. (696 aa)
	A0A0D3ENA8	MFS domain-containing protein. (574 aa)
	A0A0D3EMF7	MFS domain-containing protein. (529 aa)
	A0A0D3HJ25	MFS domain-containing protein. (428 aa)
	A0A0D3HR36	RL10P_insert domain-containing protein. (2284 aa)
	A0A0D3HS22	MFS domain-containing protein. (433 aa)
	A0A0D3HX77	Nodulin-like domain-containing protein. (567 aa)
	A0A0D3EMF0	MFS domain-containing protein. (431 aa)
	A0A0D3EM60	MFS domain-containing protein. (434 aa)
	A0A0D3EPZ3	Uncharacterized protein. (482 aa)
	A0A0D3ESZ8	Uncharacterized protein. (516 aa)
	A0A0D3EWB6	MFS domain-containing protein. (519 aa)
	A0A0D3EZQ5	Uncharacterized protein. (533 aa)
	A0A0D3EZQ6	Uncharacterized protein. (533 aa)
	A0A0D3F8B5	MFS domain-containing protein. (494 aa)
	A0A0D3F8N3	Uncharacterized protein. (428 aa)
	A0A0D3F8V6	SPX domain-containing protein. (727 aa)

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3EPZ3	A0A0D3EZQ5	Uncharacterized protein.	Uncharacterized protein.	0.815
A0A0D3EPZ3	A0A0D3EZQ6	Uncharacterized protein.	Uncharacterized protein.	0.815
A0A0D3EPZ3	A0A0D3F8B5	Uncharacterized protein.	MFS domain-containing protein.	0.402
A0A0D3EPZ3	A0A0D3FYR8	Uncharacterized protein.	MFS domain-containing protein.	0.402
A0A0D3EPZ3	A0A0D3GDG7	Uncharacterized protein.	MFS domain-containing protein.	0.402
A0A0D3EPZ3	A0A0D3GWH6	Uncharacterized protein.	MFS domain-containing protein.	0.402
A0A0D3ESZ8	A0A0D3EZQ5	Uncharacterized protein.	Uncharacterized protein.	0.809
A0A0D3ESZ8	A0A0D3EZQ6	Uncharacterized protein.	Uncharacterized protein.	0.809
A0A0D3ESZ8	A0A0D3F8B5	Uncharacterized protein.	MFS domain-containing protein.	0.402
A0A0D3ESZ8	A0A0D3FYR8	Uncharacterized protein.	MFS domain-containing protein.	0.402
A0A0D3ESZ8	A0A0D3GDG7	Uncharacterized protein.	MFS domain-containing protein.	0.402
A0A0D3ESZ8	A0A0D3GWH6	Uncharacterized protein.	MFS domain-containing protein.	0.402
A0A0D3EZQ5	A0A0D3EPZ3	Uncharacterized protein.	Uncharacterized protein.	0.815
A0A0D3EZQ5	A0A0D3ESZ8	Uncharacterized protein.	Uncharacterized protein.	0.809
A0A0D3EZQ5	A0A0D3F8B5	Uncharacterized protein.	MFS domain-containing protein.	0.402
A0A0D3EZQ5	A0A0D3FYR8	Uncharacterized protein.	MFS domain-containing protein.	0.402
A0A0D3EZQ5	A0A0D3GDG7	Uncharacterized protein.	MFS domain-containing protein.	0.402
A0A0D3EZQ5	A0A0D3GWH6	Uncharacterized protein.	MFS domain-containing protein.	0.402
A0A0D3EZQ6	A0A0D3EPZ3	Uncharacterized protein.	Uncharacterized protein.	0.815
A0A0D3EZQ6	A0A0D3ESZ8	Uncharacterized protein.	Uncharacterized protein.	0.809