(6 nodes) DNA polymerase III, subunit gamma/ tau, N-terminal network (Oryza barthii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3GVU8	AAA domain-containing protein. (795 aa)
	A0A0D3HSH9	DNA_pol3_gamma3 domain-containing protein. (1174 aa)
	A0A0D3HTF8	AAA domain-containing protein. (971 aa)
	A0A0D3HK17	DNA_pol3_gamma3 domain-containing protein. (1183 aa)
	A0A0D3ETN4	DNA_pol3_gamma3 domain-containing protein. (873 aa)
	A0A0D3GA22	DNA_pol3_gamma3 domain-containing protein. (716 aa)

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3ETN4	A0A0D3GVU8	DNA_pol3_gamma3 domain-containing protein.	AAA domain-containing protein.	0.430
A0A0D3ETN4	A0A0D3HK17	DNA_pol3_gamma3 domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.439
A0A0D3ETN4	A0A0D3HSH9	DNA_pol3_gamma3 domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.440
A0A0D3ETN4	A0A0D3HTF8	DNA_pol3_gamma3 domain-containing protein.	AAA domain-containing protein.	0.438
A0A0D3GA22	A0A0D3GVU8	DNA_pol3_gamma3 domain-containing protein.	AAA domain-containing protein.	0.424
A0A0D3GA22	A0A0D3HK17	DNA_pol3_gamma3 domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.423
A0A0D3GA22	A0A0D3HSH9	DNA_pol3_gamma3 domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.428
A0A0D3GA22	A0A0D3HTF8	DNA_pol3_gamma3 domain-containing protein.	AAA domain-containing protein.	0.422
A0A0D3GVU8	A0A0D3ETN4	AAA domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.430
A0A0D3GVU8	A0A0D3GA22	AAA domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.424
A0A0D3GVU8	A0A0D3HK17	AAA domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.419
A0A0D3GVU8	A0A0D3HSH9	AAA domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.410
A0A0D3GVU8	A0A0D3HTF8	AAA domain-containing protein.	AAA domain-containing protein.	0.401
A0A0D3HK17	A0A0D3ETN4	DNA_pol3_gamma3 domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.439
A0A0D3HK17	A0A0D3GA22	DNA_pol3_gamma3 domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.423
A0A0D3HK17	A0A0D3GVU8	DNA_pol3_gamma3 domain-containing protein.	AAA domain-containing protein.	0.419
A0A0D3HK17	A0A0D3HTF8	DNA_pol3_gamma3 domain-containing protein.	AAA domain-containing protein.	0.439
A0A0D3HSH9	A0A0D3ETN4	DNA_pol3_gamma3 domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.440
A0A0D3HSH9	A0A0D3GA22	DNA_pol3_gamma3 domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.428
A0A0D3HSH9	A0A0D3GVU8	DNA_pol3_gamma3 domain-containing protein.	AAA domain-containing protein.	0.410